Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04080 and H281DRAFT_04081 are separated by 14 nucleotides H281DRAFT_04081 and H281DRAFT_04082 are separated by 75 nucleotides H281DRAFT_04082 and H281DRAFT_04083 overlap by 4 nucleotides H281DRAFT_04083 and H281DRAFT_04084 are separated by 549 nucleotides
H281DRAFT_04080: H281DRAFT_04080 - luciferase family oxidoreductase, group 1, at 184,076 to 185,095
_04080
H281DRAFT_04081: H281DRAFT_04081 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 185,110 to 185,556
_04081
H281DRAFT_04082: H281DRAFT_04082 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 185,632 to 187,929
_04082
H281DRAFT_04083: H281DRAFT_04083 - ATP-dependent Clp protease adaptor protein ClpS, at 187,926 to 188,240
_04083
H281DRAFT_04084: H281DRAFT_04084 - cold-shock DNA-binding protein family, at 188,790 to 188,996
_04084
Position (kb) 185
186
187
188 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 184.730 kb on + strand, within H281DRAFT_04080 at 184.827 kb on - strand, within H281DRAFT_04080 at 184.877 kb on + strand, within H281DRAFT_04080 at 184.924 kb on + strand, within H281DRAFT_04080 at 184.924 kb on + strand, within H281DRAFT_04080 at 184.925 kb on - strand at 184.968 kb on + strand, within H281DRAFT_04080 at 185.022 kb on - strand at 185.043 kb on - strand at 185.043 kb on - strand at 185.620 kb on + strand at 185.634 kb on - strand at 186.201 kb on - strand, within H281DRAFT_04082 at 186.201 kb on - strand, within H281DRAFT_04082 at 186.350 kb on + strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082 at 187.146 kb on - strand, within H281DRAFT_04082 at 187.285 kb on + strand, within H281DRAFT_04082 at 187.559 kb on + strand, within H281DRAFT_04082 at 187.559 kb on + strand, within H281DRAFT_04082 at 187.562 kb on + strand, within H281DRAFT_04082 at 187.563 kb on - strand, within H281DRAFT_04082 at 188.018 kb on + strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.063 kb on + strand, within H281DRAFT_04083 at 188.064 kb on - strand, within H281DRAFT_04083 at 188.064 kb on - strand, within H281DRAFT_04083 at 188.064 kb on - strand at 188.099 kb on - strand, within H281DRAFT_04083 at 188.099 kb on - strand, within H281DRAFT_04083 at 188.164 kb on + strand, within H281DRAFT_04083 at 188.164 kb on + strand, within H281DRAFT_04083 at 188.165 kb on - strand, within H281DRAFT_04083 at 188.165 kb on - strand, within H281DRAFT_04083 at 188.205 kb on + strand, within H281DRAFT_04083 at 188.206 kb on - strand, within H281DRAFT_04083 at 188.232 kb on - strand at 188.240 kb on + strand at 188.240 kb on + strand at 188.240 kb on + strand at 188.251 kb on + strand at 188.252 kb on - strand at 188.252 kb on - strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.260 kb on - strand at 188.383 kb on - strand at 188.556 kb on - strand at 188.556 kb on - strand at 188.556 kb on - strand at 188.603 kb on - strand at 188.636 kb on - strand at 188.774 kb on + strand at 188.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 184,730 + H281DRAFT_04080 0.64 +0.4 184,827 - H281DRAFT_04080 0.74 +0.2 184,877 + H281DRAFT_04080 0.79 -0.3 184,924 + H281DRAFT_04080 0.83 -0.5 184,924 + H281DRAFT_04080 0.83 -0.2 184,925 - +2.0 184,968 + H281DRAFT_04080 0.87 +0.2 185,022 - -0.0 185,043 - -1.3 185,043 - +0.5 185,620 + -0.2 185,634 - -1.3 186,201 - H281DRAFT_04082 0.25 -2.5 186,201 - H281DRAFT_04082 0.25 -1.3 186,350 + H281DRAFT_04082 0.31 -1.0 186,351 - H281DRAFT_04082 0.31 -2.0 186,351 - H281DRAFT_04082 0.31 -1.0 186,351 - H281DRAFT_04082 0.31 -2.7 187,146 - H281DRAFT_04082 0.66 -0.6 187,285 + H281DRAFT_04082 0.72 -4.0 187,559 + H281DRAFT_04082 0.84 -2.6 187,559 + H281DRAFT_04082 0.84 -2.8 187,562 + H281DRAFT_04082 0.84 -2.0 187,563 - H281DRAFT_04082 0.84 -1.6 188,018 + H281DRAFT_04083 0.29 -3.1 188,021 - H281DRAFT_04083 0.30 -1.2 188,021 - H281DRAFT_04083 0.30 -0.9 188,021 - H281DRAFT_04083 0.30 -0.7 188,063 + H281DRAFT_04083 0.43 -4.2 188,064 - H281DRAFT_04083 0.44 -0.4 188,064 - H281DRAFT_04083 0.44 -0.5 188,064 - -1.3 188,099 - H281DRAFT_04083 0.55 -1.7 188,099 - H281DRAFT_04083 0.55 +0.5 188,164 + H281DRAFT_04083 0.76 -2.5 188,164 + H281DRAFT_04083 0.76 -3.4 188,165 - H281DRAFT_04083 0.76 -0.4 188,165 - H281DRAFT_04083 0.76 -0.2 188,205 + H281DRAFT_04083 0.89 -1.6 188,206 - H281DRAFT_04083 0.89 -0.7 188,232 - -1.1 188,240 + -3.2 188,240 + -2.3 188,240 + -2.8 188,251 + -0.9 188,252 - -0.7 188,252 - -0.1 188,259 + -3.7 188,259 + -4.7 188,259 + -3.2 188,259 + -1.6 188,260 - +0.0 188,383 - -0.0 188,556 - +0.1 188,556 - +0.6 188,556 - +0.4 188,603 - -0.0 188,636 - -0.9 188,774 + -0.8 188,775 - -0.6
Or see this region's nucleotide sequence