Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04052 and H281DRAFT_04053 are separated by 2 nucleotides H281DRAFT_04053 and H281DRAFT_04054 are separated by 166 nucleotides H281DRAFT_04054 and H281DRAFT_04055 are separated by 140 nucleotides
H281DRAFT_04052: H281DRAFT_04052 - Predicted arabinose efflux permease, MFS family, at 153,513 to 154,763
_04052
H281DRAFT_04053: H281DRAFT_04053 - ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-), at 154,766 to 155,566
_04053
H281DRAFT_04054: H281DRAFT_04054 - hypothetical protein, at 155,733 to 155,921
_04054
H281DRAFT_04055: H281DRAFT_04055 - Nucleoside-diphosphate-sugar epimerase, at 156,062 to 157,129
_04055
Position (kb) 154
155
156 Strain fitness (log2 ratio) -1
0
1
2 at 153.965 kb on - strand, within H281DRAFT_04052 at 153.965 kb on - strand, within H281DRAFT_04052 at 154.030 kb on + strand, within H281DRAFT_04052 at 154.030 kb on + strand, within H281DRAFT_04052 at 154.031 kb on - strand, within H281DRAFT_04052 at 154.111 kb on - strand, within H281DRAFT_04052 at 154.122 kb on - strand, within H281DRAFT_04052 at 154.235 kb on - strand, within H281DRAFT_04052 at 154.390 kb on + strand, within H281DRAFT_04052 at 154.390 kb on + strand, within H281DRAFT_04052 at 154.698 kb on - strand at 154.841 kb on + strand at 154.841 kb on + strand at 155.045 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.323 kb on - strand, within H281DRAFT_04053 at 155.411 kb on + strand, within H281DRAFT_04053 at 155.600 kb on + strand at 155.601 kb on - strand at 155.691 kb on + strand at 155.691 kb on + strand at 155.692 kb on - strand at 155.711 kb on - strand at 155.763 kb on + strand, within H281DRAFT_04054 at 155.841 kb on + strand, within H281DRAFT_04054 at 155.841 kb on + strand, within H281DRAFT_04054 at 155.842 kb on - strand, within H281DRAFT_04054 at 155.939 kb on + strand at 155.939 kb on + strand at 155.940 kb on - strand at 155.940 kb on - strand at 156.033 kb on + strand at 156.034 kb on - strand at 156.034 kb on - strand at 156.046 kb on + strand at 156.046 kb on + strand at 156.046 kb on + strand at 156.047 kb on - strand at 156.140 kb on + strand at 156.146 kb on + strand at 156.146 kb on + strand at 156.147 kb on - strand at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 153,965 - H281DRAFT_04052 0.36 +0.0 153,965 - H281DRAFT_04052 0.36 +1.0 154,030 + H281DRAFT_04052 0.41 -0.0 154,030 + H281DRAFT_04052 0.41 -0.4 154,031 - H281DRAFT_04052 0.41 +0.1 154,111 - H281DRAFT_04052 0.48 +0.2 154,122 - H281DRAFT_04052 0.49 +0.5 154,235 - H281DRAFT_04052 0.58 +0.7 154,390 + H281DRAFT_04052 0.70 +0.3 154,390 + H281DRAFT_04052 0.70 +0.4 154,698 - -1.4 154,841 + -0.0 154,841 + +2.0 155,045 + H281DRAFT_04053 0.35 +0.5 155,258 + H281DRAFT_04053 0.61 +0.3 155,258 + H281DRAFT_04053 0.61 +0.3 155,258 + H281DRAFT_04053 0.61 +0.3 155,259 - H281DRAFT_04053 0.62 -0.7 155,259 - H281DRAFT_04053 0.62 +0.4 155,323 - H281DRAFT_04053 0.70 -0.1 155,411 + H281DRAFT_04053 0.81 +0.2 155,600 + -0.3 155,601 - -0.0 155,691 + +1.0 155,691 + +1.5 155,692 - +1.0 155,711 - +0.0 155,763 + H281DRAFT_04054 0.16 -0.4 155,841 + H281DRAFT_04054 0.57 -1.4 155,841 + H281DRAFT_04054 0.57 +2.4 155,842 - H281DRAFT_04054 0.58 -0.1 155,939 + +0.1 155,939 + +0.1 155,940 - -0.3 155,940 - +0.3 156,033 + -0.1 156,034 - -0.3 156,034 - -1.5 156,046 + +0.8 156,046 + +2.6 156,046 + +1.0 156,047 - +0.2 156,140 + -0.1 156,146 + -0.2 156,146 + +1.8 156,147 - +0.3 156,292 - H281DRAFT_04055 0.22 -0.8 156,292 - H281DRAFT_04055 0.22 +0.2 156,292 - H281DRAFT_04055 0.22 +0.8 156,480 + H281DRAFT_04055 0.39 -0.3 156,480 + H281DRAFT_04055 0.39 -0.6 156,481 - H281DRAFT_04055 0.39 -0.2 156,481 - H281DRAFT_04055 0.39 +0.9 156,481 - H281DRAFT_04055 0.39 -0.4
Or see this region's nucleotide sequence