Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04051 and H281DRAFT_04052 are separated by 218 nucleotides H281DRAFT_04052 and H281DRAFT_04053 are separated by 2 nucleotides H281DRAFT_04053 and H281DRAFT_04054 are separated by 166 nucleotides
H281DRAFT_04051: H281DRAFT_04051 - transcriptional regulator, RpiR family, at 152,356 to 153,294
_04051
H281DRAFT_04052: H281DRAFT_04052 - Predicted arabinose efflux permease, MFS family, at 153,513 to 154,763
_04052
H281DRAFT_04053: H281DRAFT_04053 - ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-), at 154,766 to 155,566
_04053
H281DRAFT_04054: H281DRAFT_04054 - hypothetical protein, at 155,733 to 155,921
_04054
Position (kb) 153
154
155 Strain fitness (log2 ratio) -1
0
1
2 at 152.634 kb on - strand, within H281DRAFT_04051 at 152.748 kb on - strand, within H281DRAFT_04051 at 152.859 kb on - strand, within H281DRAFT_04051 at 153.254 kb on + strand at 153.264 kb on + strand at 153.288 kb on + strand at 153.288 kb on + strand at 153.289 kb on - strand at 153.398 kb on - strand at 153.432 kb on - strand at 153.965 kb on - strand, within H281DRAFT_04052 at 153.965 kb on - strand, within H281DRAFT_04052 at 154.030 kb on + strand, within H281DRAFT_04052 at 154.030 kb on + strand, within H281DRAFT_04052 at 154.031 kb on - strand, within H281DRAFT_04052 at 154.111 kb on - strand, within H281DRAFT_04052 at 154.122 kb on - strand, within H281DRAFT_04052 at 154.235 kb on - strand, within H281DRAFT_04052 at 154.390 kb on + strand, within H281DRAFT_04052 at 154.390 kb on + strand, within H281DRAFT_04052 at 154.698 kb on - strand at 154.841 kb on + strand at 154.841 kb on + strand at 155.045 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.258 kb on + strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.259 kb on - strand, within H281DRAFT_04053 at 155.323 kb on - strand, within H281DRAFT_04053 at 155.411 kb on + strand, within H281DRAFT_04053 at 155.600 kb on + strand at 155.601 kb on - strand at 155.691 kb on + strand at 155.691 kb on + strand at 155.692 kb on - strand at 155.711 kb on - strand at 155.763 kb on + strand, within H281DRAFT_04054
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 152,634 - H281DRAFT_04051 0.30 -1.1 152,748 - H281DRAFT_04051 0.42 +0.6 152,859 - H281DRAFT_04051 0.54 -0.8 153,254 + +0.4 153,264 + +0.6 153,288 + -0.0 153,288 + +0.2 153,289 - -0.8 153,398 - -0.4 153,432 - +0.0 153,965 - H281DRAFT_04052 0.36 +0.0 153,965 - H281DRAFT_04052 0.36 +1.0 154,030 + H281DRAFT_04052 0.41 -0.0 154,030 + H281DRAFT_04052 0.41 -0.4 154,031 - H281DRAFT_04052 0.41 +0.1 154,111 - H281DRAFT_04052 0.48 +0.2 154,122 - H281DRAFT_04052 0.49 +0.5 154,235 - H281DRAFT_04052 0.58 +0.7 154,390 + H281DRAFT_04052 0.70 +0.3 154,390 + H281DRAFT_04052 0.70 +0.4 154,698 - -1.4 154,841 + -0.0 154,841 + +2.0 155,045 + H281DRAFT_04053 0.35 +0.5 155,258 + H281DRAFT_04053 0.61 +0.3 155,258 + H281DRAFT_04053 0.61 +0.3 155,258 + H281DRAFT_04053 0.61 +0.3 155,259 - H281DRAFT_04053 0.62 -0.7 155,259 - H281DRAFT_04053 0.62 +0.4 155,323 - H281DRAFT_04053 0.70 -0.1 155,411 + H281DRAFT_04053 0.81 +0.2 155,600 + -0.3 155,601 - -0.0 155,691 + +1.0 155,691 + +1.5 155,692 - +1.0 155,711 - +0.0 155,763 + H281DRAFT_04054 0.16 -0.4
Or see this region's nucleotide sequence