Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03772

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03770 and H281DRAFT_03771 are separated by 328 nucleotidesH281DRAFT_03771 and H281DRAFT_03772 are separated by 308 nucleotidesH281DRAFT_03772 and H281DRAFT_03773 overlap by 22 nucleotides H281DRAFT_03770: H281DRAFT_03770 - hypothetical protein, at 287,815 to 288,021 _03770 H281DRAFT_03771: H281DRAFT_03771 - hypothetical protein, at 288,350 to 288,568 _03771 H281DRAFT_03772: H281DRAFT_03772 - hypothetical protein, at 288,877 to 289,404 _03772 H281DRAFT_03773: H281DRAFT_03773 - serine/threonine protein kinase, at 289,383 to 291,551 _03773 Position (kb) 288 289 290Strain fitness (log2 ratio) -1 0 1at 288.072 kb on - strandat 288.219 kb on + strandat 288.380 kb on + strand, within H281DRAFT_03771at 288.381 kb on - strand, within H281DRAFT_03771at 288.381 kb on - strand, within H281DRAFT_03771at 288.670 kb on + strandat 289.527 kb on - strandat 289.552 kb on - strandat 290.017 kb on - strand, within H281DRAFT_03773at 290.124 kb on + strand, within H281DRAFT_03773

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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288,072 - +0.0
288,219 + -0.0
288,380 + H281DRAFT_03771 0.14 -0.4
288,381 - H281DRAFT_03771 0.14 -1.1
288,381 - H281DRAFT_03771 0.14 -0.1
288,670 + -0.1
289,527 - -0.1
289,552 - -0.1
290,017 - H281DRAFT_03773 0.29 -0.5
290,124 + H281DRAFT_03773 0.34 -0.5

Or see this region's nucleotide sequence