Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03610 and H281DRAFT_03611 are separated by 3 nucleotides H281DRAFT_03611 and H281DRAFT_03612 are separated by 46 nucleotides
H281DRAFT_03610: H281DRAFT_03610 - squalene-hopene/tetraprenyl-beta-curcumene cyclase, at 118,918 to 120,978
_03610
H281DRAFT_03611: H281DRAFT_03611 - hopanoid-associated phosphorylase, at 120,982 to 121,710
_03611
H281DRAFT_03612: H281DRAFT_03612 - phospholipid-binding lipoprotein MlaA, at 121,757 to 122,827
_03612
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-1
0
1 at 120.160 kb on + strand, within H281DRAFT_03610 at 120.331 kb on + strand, within H281DRAFT_03610 at 120.332 kb on - strand, within H281DRAFT_03610 at 120.334 kb on + strand, within H281DRAFT_03610 at 120.476 kb on - strand, within H281DRAFT_03610 at 120.538 kb on + strand, within H281DRAFT_03610 at 120.539 kb on - strand, within H281DRAFT_03610 at 120.797 kb on - strand at 120.976 kb on + strand at 120.977 kb on - strand at 120.977 kb on - strand at 121.100 kb on - strand, within H281DRAFT_03611 at 121.206 kb on - strand, within H281DRAFT_03611 at 121.510 kb on - strand at 121.510 kb on - strand, within H281DRAFT_03611 at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.793 kb on - strand at 121.793 kb on - strand at 121.888 kb on + strand, within H281DRAFT_03612 at 122.047 kb on - strand, within H281DRAFT_03612 at 122.189 kb on - strand, within H281DRAFT_03612 at 122.190 kb on + strand, within H281DRAFT_03612 at 122.190 kb on + strand, within H281DRAFT_03612 at 122.191 kb on - strand, within H281DRAFT_03612 at 122.191 kb on - strand, within H281DRAFT_03612 at 122.211 kb on + strand, within H281DRAFT_03612 at 122.211 kb on + strand, within H281DRAFT_03612 at 122.211 kb on + strand, within H281DRAFT_03612 at 122.215 kb on + strand, within H281DRAFT_03612 at 122.319 kb on + strand, within H281DRAFT_03612 at 122.319 kb on + strand, within H281DRAFT_03612 at 122.320 kb on - strand, within H281DRAFT_03612 at 122.320 kb on - strand, within H281DRAFT_03612 at 122.320 kb on - strand, within H281DRAFT_03612 at 122.320 kb on - strand, within H281DRAFT_03612 at 122.320 kb on - strand, within H281DRAFT_03612 at 122.404 kb on - strand, within H281DRAFT_03612 at 122.658 kb on + strand, within H281DRAFT_03612 at 122.686 kb on - strand, within H281DRAFT_03612
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 120,160 + H281DRAFT_03610 0.60 +0.4 120,331 + H281DRAFT_03610 0.69 +0.5 120,332 - H281DRAFT_03610 0.69 -0.1 120,334 + H281DRAFT_03610 0.69 +1.1 120,476 - H281DRAFT_03610 0.76 +0.8 120,538 + H281DRAFT_03610 0.79 +0.4 120,539 - H281DRAFT_03610 0.79 +0.6 120,797 - +0.3 120,976 + +0.8 120,977 - +1.6 120,977 - +1.2 121,100 - H281DRAFT_03611 0.16 +1.6 121,206 - H281DRAFT_03611 0.31 +0.8 121,510 - -1.7 121,510 - H281DRAFT_03611 0.72 +0.8 121,759 - -0.2 121,759 - +0.1 121,759 - +0.3 121,759 - -0.3 121,793 - -0.1 121,793 - -0.0 121,888 + H281DRAFT_03612 0.12 -0.4 122,047 - H281DRAFT_03612 0.27 +1.1 122,189 - H281DRAFT_03612 0.40 -0.1 122,190 + H281DRAFT_03612 0.40 +0.6 122,190 + H281DRAFT_03612 0.40 +0.6 122,191 - H281DRAFT_03612 0.41 +0.8 122,191 - H281DRAFT_03612 0.41 -1.7 122,211 + H281DRAFT_03612 0.42 -0.5 122,211 + H281DRAFT_03612 0.42 +0.8 122,211 + H281DRAFT_03612 0.42 +0.2 122,215 + H281DRAFT_03612 0.43 -0.0 122,319 + H281DRAFT_03612 0.52 +0.4 122,319 + H281DRAFT_03612 0.52 +0.1 122,320 - H281DRAFT_03612 0.53 +0.5 122,320 - H281DRAFT_03612 0.53 +0.0 122,320 - H281DRAFT_03612 0.53 +0.5 122,320 - H281DRAFT_03612 0.53 +0.3 122,320 - H281DRAFT_03612 0.53 +0.8 122,404 - H281DRAFT_03612 0.60 +0.1 122,658 + H281DRAFT_03612 0.84 -0.2 122,686 - H281DRAFT_03612 0.87 +0.9
Or see this region's nucleotide sequence