Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03471 and H281DRAFT_03472 are separated by 349 nucleotides H281DRAFT_03472 and H281DRAFT_03473 are separated by 154 nucleotides H281DRAFT_03473 and H281DRAFT_03474 are separated by 289 nucleotides H281DRAFT_03474 and H281DRAFT_03475 are separated by 5 nucleotides
H281DRAFT_03471: H281DRAFT_03471 - Carboxypeptidase C (cathepsin A), at 554,557 to 556,212
_03471
H281DRAFT_03472: H281DRAFT_03472 - hypothetical protein, at 556,562 to 557,014
_03472
H281DRAFT_03473: H281DRAFT_03473 - hypothetical protein, at 557,169 to 557,528
_03473
H281DRAFT_03474: H281DRAFT_03474 - hypothetical protein, at 557,818 to 557,964
_03474
H281DRAFT_03475: H281DRAFT_03475 - hypothetical protein, at 557,970 to 558,236
_03475
Position (kb) 556
557
558 Strain fitness (log2 ratio) -2
-1
0
1 at 555.593 kb on + strand, within H281DRAFT_03471 at 555.640 kb on + strand, within H281DRAFT_03471 at 555.739 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.781 kb on + strand, within H281DRAFT_03471 at 555.782 kb on - strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.995 kb on - strand, within H281DRAFT_03471 at 556.141 kb on + strand at 556.141 kb on + strand at 556.179 kb on + strand at 556.211 kb on - strand at 556.346 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.432 kb on + strand at 556.433 kb on - strand at 556.606 kb on - strand at 556.620 kb on - strand, within H281DRAFT_03472 at 557.152 kb on - strand at 557.242 kb on + strand, within H281DRAFT_03473 at 557.242 kb on + strand, within H281DRAFT_03473 at 557.328 kb on + strand, within H281DRAFT_03473 at 557.398 kb on + strand, within H281DRAFT_03473 at 557.399 kb on - strand, within H281DRAFT_03473 at 557.571 kb on - strand at 557.703 kb on + strand at 557.704 kb on - strand at 557.704 kb on - strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.949 kb on + strand, within H281DRAFT_03474 at 557.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 555,593 + H281DRAFT_03471 0.63 +0.0 555,640 + H281DRAFT_03471 0.65 +1.0 555,739 + H281DRAFT_03471 0.71 -0.1 555,760 + H281DRAFT_03471 0.73 +0.2 555,760 + H281DRAFT_03471 0.73 -0.5 555,781 + H281DRAFT_03471 0.74 -0.4 555,782 - H281DRAFT_03471 0.74 -0.9 555,899 + H281DRAFT_03471 0.81 +0.6 555,899 + H281DRAFT_03471 0.81 -2.0 555,899 + H281DRAFT_03471 0.81 -0.8 555,901 + H281DRAFT_03471 0.81 -0.8 555,901 + H281DRAFT_03471 0.81 -1.0 555,994 + H281DRAFT_03471 0.87 -0.9 555,994 + H281DRAFT_03471 0.87 -2.3 555,995 - H281DRAFT_03471 0.87 -0.1 556,141 + +0.4 556,141 + -0.9 556,179 + -1.5 556,211 - +1.1 556,346 + -2.2 556,428 + +1.5 556,428 + +0.3 556,428 + +1.0 556,429 - +1.3 556,429 - +0.7 556,429 - +0.4 556,429 - +0.5 556,429 - +1.6 556,429 - +0.5 556,429 - +0.6 556,432 + +1.2 556,433 - +0.2 556,606 - +1.2 556,620 - H281DRAFT_03472 0.13 -0.2 557,152 - +0.2 557,242 + H281DRAFT_03473 0.20 +1.6 557,242 + H281DRAFT_03473 0.20 -0.2 557,328 + H281DRAFT_03473 0.44 +0.0 557,398 + H281DRAFT_03473 0.64 +0.9 557,399 - H281DRAFT_03473 0.64 +0.5 557,571 - +0.6 557,703 + -2.2 557,704 - +0.5 557,704 - +0.2 557,830 + +0.4 557,830 + +0.6 557,830 + +0.2 557,831 - +0.0 557,831 - -1.1 557,831 - +1.1 557,949 + H281DRAFT_03474 0.89 -1.1 557,950 - -0.1
Or see this region's nucleotide sequence