Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03467 and H281DRAFT_03468 are separated by 363 nucleotides H281DRAFT_03468 and H281DRAFT_03469 are separated by 82 nucleotides H281DRAFT_03469 and H281DRAFT_03470 are separated by 308 nucleotides
H281DRAFT_03467: H281DRAFT_03467 - Threonine/homoserine/homoserine lactone efflux protein, at 550,691 to 551,356
_03467
H281DRAFT_03468: H281DRAFT_03468 - small multidrug resistance family-3 protein, at 551,720 to 552,040
_03468
H281DRAFT_03469: H281DRAFT_03469 - hypothetical protein, at 552,123 to 552,632
_03469
H281DRAFT_03470: H281DRAFT_03470 - kumamolisin. Serine peptidase. MEROPS family S53, at 552,941 to 554,560
_03470
Position (kb) 552
553 Strain fitness (log2 ratio) -1
0
1 at 551.234 kb on + strand, within H281DRAFT_03467 at 551.235 kb on - strand, within H281DRAFT_03467 at 551.547 kb on + strand at 551.629 kb on - strand at 551.631 kb on + strand at 551.632 kb on - strand at 551.774 kb on + strand, within H281DRAFT_03468 at 551.774 kb on + strand, within H281DRAFT_03468 at 551.774 kb on + strand, within H281DRAFT_03468 at 551.775 kb on - strand, within H281DRAFT_03468 at 551.775 kb on - strand, within H281DRAFT_03468 at 551.894 kb on + strand, within H281DRAFT_03468 at 551.904 kb on - strand, within H281DRAFT_03468 at 551.915 kb on + strand, within H281DRAFT_03468 at 551.915 kb on + strand, within H281DRAFT_03468 at 551.916 kb on - strand, within H281DRAFT_03468 at 551.916 kb on - strand, within H281DRAFT_03468 at 551.916 kb on - strand, within H281DRAFT_03468 at 551.965 kb on + strand, within H281DRAFT_03468 at 551.965 kb on + strand, within H281DRAFT_03468 at 551.966 kb on - strand, within H281DRAFT_03468 at 552.142 kb on + strand at 552.238 kb on + strand, within H281DRAFT_03469 at 552.238 kb on + strand, within H281DRAFT_03469 at 552.338 kb on - strand, within H281DRAFT_03469 at 552.338 kb on - strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.617 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.981 kb on + strand at 552.982 kb on - strand at 553.149 kb on - strand, within H281DRAFT_03470 at 553.499 kb on + strand, within H281DRAFT_03470 at 553.586 kb on + strand, within H281DRAFT_03470 at 553.586 kb on + strand, within H281DRAFT_03470
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 551,234 + H281DRAFT_03467 0.82 -0.1 551,235 - H281DRAFT_03467 0.82 +0.2 551,547 + -0.3 551,629 - -0.2 551,631 + +0.1 551,632 - -0.5 551,774 + H281DRAFT_03468 0.17 +0.5 551,774 + H281DRAFT_03468 0.17 +0.2 551,774 + H281DRAFT_03468 0.17 +0.2 551,775 - H281DRAFT_03468 0.17 -0.5 551,775 - H281DRAFT_03468 0.17 +0.4 551,894 + H281DRAFT_03468 0.54 +0.9 551,904 - H281DRAFT_03468 0.57 +0.2 551,915 + H281DRAFT_03468 0.61 -0.3 551,915 + H281DRAFT_03468 0.61 -0.0 551,916 - H281DRAFT_03468 0.61 -1.1 551,916 - H281DRAFT_03468 0.61 +0.2 551,916 - H281DRAFT_03468 0.61 -0.5 551,965 + H281DRAFT_03468 0.76 +1.0 551,965 + H281DRAFT_03468 0.76 -0.2 551,966 - H281DRAFT_03468 0.77 +0.9 552,142 + +0.2 552,238 + H281DRAFT_03469 0.23 -0.4 552,238 + H281DRAFT_03469 0.23 -0.2 552,338 - H281DRAFT_03469 0.42 +0.8 552,338 - H281DRAFT_03469 0.42 +0.4 552,460 + H281DRAFT_03469 0.66 -1.3 552,460 + H281DRAFT_03469 0.66 -0.7 552,460 + H281DRAFT_03469 0.66 -0.2 552,460 + H281DRAFT_03469 0.66 +0.1 552,461 - H281DRAFT_03469 0.66 -0.3 552,461 - H281DRAFT_03469 0.66 -0.2 552,461 - H281DRAFT_03469 0.66 -0.1 552,461 - H281DRAFT_03469 0.66 -0.7 552,617 - -0.4 552,684 - +0.3 552,684 - +0.5 552,684 - -0.7 552,684 - +1.0 552,981 + +0.2 552,982 - +0.5 553,149 - H281DRAFT_03470 0.13 -0.2 553,499 + H281DRAFT_03470 0.34 -0.3 553,586 + H281DRAFT_03470 0.40 -1.0 553,586 + H281DRAFT_03470 0.40 -1.1
Or see this region's nucleotide sequence