Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03462 and H281DRAFT_03463 are separated by 202 nucleotides H281DRAFT_03463 and H281DRAFT_03464 are separated by 87 nucleotides H281DRAFT_03464 and H281DRAFT_03465 are separated by 108 nucleotides H281DRAFT_03465 and H281DRAFT_03466 are separated by 67 nucleotides
H281DRAFT_03462: H281DRAFT_03462 - membrane protein DedA, SNARE-associated domain, at 546,520 to 548,523
_03462
H281DRAFT_03463: H281DRAFT_03463 - hypothetical protein, at 548,726 to 549,076
_03463
H281DRAFT_03464: H281DRAFT_03464 - Organic hydroperoxide reductase OsmC/OhrA, at 549,164 to 549,640
_03464
H281DRAFT_03465: H281DRAFT_03465 - hypothetical protein, at 549,749 to 550,000
_03465
H281DRAFT_03466: H281DRAFT_03466 - transcriptional regulator, AsnC family, at 550,068 to 550,535
_03466
Position (kb) 548
549
550 Strain fitness (log2 ratio) -1
0
1
2 at 548.049 kb on + strand, within H281DRAFT_03462 at 548.137 kb on + strand, within H281DRAFT_03462 at 548.415 kb on + strand at 548.455 kb on + strand at 548.510 kb on + strand at 548.510 kb on + strand at 548.511 kb on - strand at 548.548 kb on + strand at 548.582 kb on - strand at 548.643 kb on + strand at 548.788 kb on + strand, within H281DRAFT_03463 at 549.074 kb on + strand at 549.150 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.186 kb on - strand at 549.186 kb on - strand at 549.429 kb on - strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.577 kb on + strand, within H281DRAFT_03464 at 549.647 kb on + strand at 549.647 kb on + strand at 549.684 kb on + strand at 549.713 kb on - strand at 550.005 kb on + strand at 550.052 kb on + strand at 550.052 kb on + strand at 550.053 kb on - strand at 550.053 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 548,049 + H281DRAFT_03462 0.76 +0.1 548,137 + H281DRAFT_03462 0.81 +0.2 548,415 + +0.2 548,455 + +0.2 548,510 + +0.6 548,510 + +1.3 548,511 - +0.5 548,548 + -0.1 548,582 - +0.3 548,643 + +0.9 548,788 + H281DRAFT_03463 0.18 +1.8 549,074 + -0.1 549,150 + -0.1 549,185 + +0.8 549,185 + +0.1 549,185 + +1.4 549,185 + +1.0 549,186 - +0.2 549,186 - -0.0 549,429 - H281DRAFT_03464 0.56 +0.6 549,575 + H281DRAFT_03464 0.86 -0.3 549,575 + H281DRAFT_03464 0.86 -0.2 549,575 + H281DRAFT_03464 0.86 +0.3 549,575 + H281DRAFT_03464 0.86 +0.3 549,575 + H281DRAFT_03464 0.86 +1.9 549,575 + H281DRAFT_03464 0.86 +0.4 549,575 + H281DRAFT_03464 0.86 -0.3 549,576 - H281DRAFT_03464 0.86 +0.1 549,576 - H281DRAFT_03464 0.86 +0.7 549,576 - H281DRAFT_03464 0.86 +0.8 549,576 - H281DRAFT_03464 0.86 -0.6 549,576 - H281DRAFT_03464 0.86 +0.5 549,577 + H281DRAFT_03464 0.87 -0.6 549,647 + -0.4 549,647 + -0.1 549,684 + +0.2 549,713 - -1.0 550,005 + +0.1 550,052 + -0.6 550,052 + +0.2 550,053 - -0.0 550,053 - -0.2
Or see this region's nucleotide sequence