Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03382 and H281DRAFT_03383 overlap by 4 nucleotides H281DRAFT_03383 and H281DRAFT_03384 overlap by 4 nucleotides H281DRAFT_03384 and H281DRAFT_03385 are separated by 84 nucleotides
H281DRAFT_03382: H281DRAFT_03382 - CO or xanthine dehydrogenase, Mo-binding subunit, at 448,497 to 450,761
_03382
H281DRAFT_03383: H281DRAFT_03383 - Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family, at 450,758 to 451,270
_03383
H281DRAFT_03384: H281DRAFT_03384 - Cytochrome c, mono- and diheme variants, at 451,267 to 452,544
_03384
H281DRAFT_03385: H281DRAFT_03385 - NADPH2 dehydrogenase, at 452,629 to 453,771
_03385
Position (kb) 451
452
453 Strain fitness (log2 ratio) -2
-1
0
1 at 450.525 kb on + strand, within H281DRAFT_03382 at 451.203 kb on + strand, within H281DRAFT_03383 at 451.204 kb on - strand, within H281DRAFT_03383 at 451.260 kb on - strand at 451.297 kb on - strand at 451.388 kb on + strand at 451.671 kb on - strand, within H281DRAFT_03384 at 452.610 kb on + strand at 452.790 kb on - strand, within H281DRAFT_03385 at 452.911 kb on - strand, within H281DRAFT_03385 at 452.966 kb on + strand, within H281DRAFT_03385 at 453.113 kb on - strand, within H281DRAFT_03385
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 450,525 + H281DRAFT_03382 0.90 -1.5 451,203 + H281DRAFT_03383 0.87 +0.2 451,204 - H281DRAFT_03383 0.87 -0.2 451,260 - +0.2 451,297 - +1.0 451,388 + +0.1 451,671 - H281DRAFT_03384 0.32 -1.1 452,610 + -0.0 452,790 - H281DRAFT_03385 0.14 +0.1 452,911 - H281DRAFT_03385 0.25 +0.5 452,966 + H281DRAFT_03385 0.29 -1.9 453,113 - H281DRAFT_03385 0.42 -0.3
Or see this region's nucleotide sequence