Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02996 and H281DRAFT_02997 overlap by 4 nucleotides H281DRAFT_02997 and H281DRAFT_02998 are separated by 80 nucleotides H281DRAFT_02998 and H281DRAFT_02999 are separated by 184 nucleotides
H281DRAFT_02996: H281DRAFT_02996 - ABC-2 type transport system ATP-binding protein, at 18,980 to 20,044
_02996
H281DRAFT_02997: H281DRAFT_02997 - ABC-2 type transport system permease protein, at 20,041 to 20,802
_02997
H281DRAFT_02998: H281DRAFT_02998 - transcriptional regulator, LuxR family, at 20,883 to 21,878
_02998
H281DRAFT_02999: H281DRAFT_02999 - transcriptional regulator, AraC family, at 22,063 to 22,977
_02999
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.898 kb on + strand, within H281DRAFT_02996 at 19.899 kb on - strand, within H281DRAFT_02996 at 19.899 kb on - strand, within H281DRAFT_02996 at 19.904 kb on + strand, within H281DRAFT_02996 at 19.904 kb on + strand, within H281DRAFT_02996 at 19.905 kb on - strand, within H281DRAFT_02996 at 20.143 kb on + strand, within H281DRAFT_02997 at 20.203 kb on + strand, within H281DRAFT_02997 at 20.256 kb on + strand, within H281DRAFT_02997 at 20.256 kb on + strand, within H281DRAFT_02997 at 20.257 kb on - strand, within H281DRAFT_02997 at 20.257 kb on - strand, within H281DRAFT_02997 at 20.282 kb on - strand, within H281DRAFT_02997 at 20.282 kb on - strand, within H281DRAFT_02997 at 20.516 kb on + strand, within H281DRAFT_02997 at 20.517 kb on - strand, within H281DRAFT_02997 at 20.527 kb on - strand, within H281DRAFT_02997 at 20.596 kb on + strand, within H281DRAFT_02997 at 20.596 kb on + strand, within H281DRAFT_02997 at 20.656 kb on + strand, within H281DRAFT_02997 at 20.804 kb on + strand at 20.804 kb on + strand at 20.805 kb on - strand at 20.863 kb on + strand at 20.885 kb on - strand at 20.893 kb on + strand at 20.894 kb on - strand at 20.919 kb on + strand at 20.919 kb on + strand at 20.920 kb on - strand at 20.966 kb on - strand at 20.966 kb on - strand at 20.975 kb on + strand at 21.100 kb on - strand, within H281DRAFT_02998 at 21.421 kb on + strand, within H281DRAFT_02998 at 21.422 kb on - strand, within H281DRAFT_02998 at 21.464 kb on - strand, within H281DRAFT_02998 at 21.517 kb on + strand, within H281DRAFT_02998 at 21.518 kb on - strand, within H281DRAFT_02998 at 21.518 kb on - strand, within H281DRAFT_02998 at 21.799 kb on + strand at 21.799 kb on + strand at 21.800 kb on - strand at 21.800 kb on - strand at 21.800 kb on - strand at 21.924 kb on - strand at 21.930 kb on + strand at 21.930 kb on + strand at 21.931 kb on - strand at 21.934 kb on + strand at 21.934 kb on + strand at 21.935 kb on - strand at 22.109 kb on - strand at 22.175 kb on - strand, within H281DRAFT_02999 at 22.321 kb on + strand, within H281DRAFT_02999 at 22.322 kb on - strand at 22.391 kb on + strand, within H281DRAFT_02999 at 22.391 kb on + strand, within H281DRAFT_02999 at 22.395 kb on + strand, within H281DRAFT_02999 at 22.396 kb on - strand, within H281DRAFT_02999 at 22.396 kb on - strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.607 kb on - strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.691 kb on - strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.751 kb on + strand, within H281DRAFT_02999 at 22.810 kb on + strand, within H281DRAFT_02999
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 19,898 + H281DRAFT_02996 0.86 -0.4 19,899 - H281DRAFT_02996 0.86 +0.9 19,899 - H281DRAFT_02996 0.86 -0.0 19,904 + H281DRAFT_02996 0.87 -0.1 19,904 + H281DRAFT_02996 0.87 -1.1 19,905 - H281DRAFT_02996 0.87 +0.1 20,143 + H281DRAFT_02997 0.13 +1.9 20,203 + H281DRAFT_02997 0.21 -0.2 20,256 + H281DRAFT_02997 0.28 +0.5 20,256 + H281DRAFT_02997 0.28 +0.1 20,257 - H281DRAFT_02997 0.28 -0.1 20,257 - H281DRAFT_02997 0.28 +0.9 20,282 - H281DRAFT_02997 0.32 +0.1 20,282 - H281DRAFT_02997 0.32 -0.9 20,516 + H281DRAFT_02997 0.62 -1.7 20,517 - H281DRAFT_02997 0.62 -0.0 20,527 - H281DRAFT_02997 0.64 -1.0 20,596 + H281DRAFT_02997 0.73 +0.5 20,596 + H281DRAFT_02997 0.73 +0.2 20,656 + H281DRAFT_02997 0.81 +1.4 20,804 + +0.3 20,804 + -0.3 20,805 - -0.1 20,863 + +0.1 20,885 - +0.2 20,893 + -0.3 20,894 - +0.5 20,919 + +0.9 20,919 + +0.5 20,920 - -1.3 20,966 - +0.8 20,966 - +0.3 20,975 + -0.7 21,100 - H281DRAFT_02998 0.22 +0.5 21,421 + H281DRAFT_02998 0.54 +0.4 21,422 - H281DRAFT_02998 0.54 +1.8 21,464 - H281DRAFT_02998 0.58 +0.5 21,517 + H281DRAFT_02998 0.64 +0.3 21,518 - H281DRAFT_02998 0.64 +0.7 21,518 - H281DRAFT_02998 0.64 +0.7 21,799 + -0.9 21,799 + +0.5 21,800 - -0.9 21,800 - +0.5 21,800 - +0.4 21,924 - +0.5 21,930 + -1.8 21,930 + +0.5 21,931 - -0.5 21,934 + +0.1 21,934 + +1.2 21,935 - +1.6 22,109 - -0.1 22,175 - H281DRAFT_02999 0.12 +2.3 22,321 + H281DRAFT_02999 0.28 -0.0 22,322 - +1.3 22,391 + H281DRAFT_02999 0.36 +0.4 22,391 + H281DRAFT_02999 0.36 +0.3 22,395 + H281DRAFT_02999 0.36 +0.2 22,396 - H281DRAFT_02999 0.36 +1.5 22,396 - H281DRAFT_02999 0.36 +0.1 22,558 + H281DRAFT_02999 0.54 -0.1 22,558 + H281DRAFT_02999 0.54 +0.3 22,558 + H281DRAFT_02999 0.54 +0.6 22,607 - H281DRAFT_02999 0.59 +0.9 22,690 + H281DRAFT_02999 0.69 -0.0 22,690 + H281DRAFT_02999 0.69 -0.7 22,690 + H281DRAFT_02999 0.69 -0.7 22,690 + H281DRAFT_02999 0.69 +0.1 22,691 - H281DRAFT_02999 0.69 +2.3 22,694 + H281DRAFT_02999 0.69 +0.1 22,694 + H281DRAFT_02999 0.69 +1.2 22,694 + H281DRAFT_02999 0.69 +0.1 22,694 + H281DRAFT_02999 0.69 +0.2 22,751 + H281DRAFT_02999 0.75 +0.5 22,810 + H281DRAFT_02999 0.82 -0.1
Or see this region's nucleotide sequence