Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02959 and H281DRAFT_02960 are separated by 31 nucleotides H281DRAFT_02960 and H281DRAFT_02961 are separated by 1 nucleotides H281DRAFT_02961 and H281DRAFT_02962 are separated by 42 nucleotides
H281DRAFT_02959: H281DRAFT_02959 - putative spermidine/putrescine transport system substrate-binding protein, at 573,350 to 574,651
_02959
H281DRAFT_02960: H281DRAFT_02960 - putative spermidine/putrescine transport system permease protein, at 574,683 to 575,597
_02960
H281DRAFT_02961: H281DRAFT_02961 - putative spermidine/putrescine transport system permease protein, at 575,599 to 576,495
_02961
H281DRAFT_02962: H281DRAFT_02962 - transcriptional regulator, TetR family, at 576,538 to 577,251
_02962
Position (kb) 574
575
576 Strain fitness (log2 ratio) -1
0
1 at 574.389 kb on - strand, within H281DRAFT_02959 at 574.407 kb on - strand, within H281DRAFT_02959 at 574.442 kb on - strand, within H281DRAFT_02959 at 574.613 kb on + strand at 574.614 kb on - strand at 574.845 kb on + strand, within H281DRAFT_02960 at 574.939 kb on - strand, within H281DRAFT_02960 at 575.007 kb on + strand, within H281DRAFT_02960 at 575.142 kb on - strand, within H281DRAFT_02960 at 575.197 kb on - strand, within H281DRAFT_02960 at 575.768 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 574,389 - H281DRAFT_02959 0.80 -0.7 574,407 - H281DRAFT_02959 0.81 -0.5 574,442 - H281DRAFT_02959 0.84 -0.5 574,613 + +0.4 574,614 - -1.3 574,845 + H281DRAFT_02960 0.18 -1.0 574,939 - H281DRAFT_02960 0.28 -0.2 575,007 + H281DRAFT_02960 0.35 +0.1 575,142 - H281DRAFT_02960 0.50 -1.0 575,197 - H281DRAFT_02960 0.56 +0.5 575,768 + +1.2
Or see this region's nucleotide sequence