Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02938 and H281DRAFT_02939 are separated by 313 nucleotides H281DRAFT_02939 and H281DRAFT_02940 are separated by 379 nucleotides H281DRAFT_02940 and H281DRAFT_02941 are separated by 33 nucleotides
H281DRAFT_02938: H281DRAFT_02938 - Fucose 4-O-acetylase, at 550,511 to 551,602
_02938
H281DRAFT_02939: H281DRAFT_02939 - hypothetical protein, at 551,916 to 552,053
_02939
H281DRAFT_02940: H281DRAFT_02940 - beta-methylmalyl-CoA/L-malyl-CoA lyase (EC 4.1.3.24), at 552,433 to 553,365
_02940
H281DRAFT_02941: H281DRAFT_02941 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 553,399 to 554,562
_02941
Position (kb) 552
553
554 Strain fitness (log2 ratio) -1
0
1
2
3 at 551.505 kb on - strand at 551.655 kb on - strand at 551.739 kb on + strand at 551.917 kb on + strand at 551.917 kb on + strand at 551.990 kb on + strand, within H281DRAFT_02939 at 551.991 kb on - strand, within H281DRAFT_02939 at 553.095 kb on + strand, within H281DRAFT_02940 at 553.317 kb on + strand at 553.317 kb on + strand at 553.318 kb on - strand at 553.372 kb on - strand at 553.534 kb on + strand, within H281DRAFT_02941 at 554.206 kb on + strand, within H281DRAFT_02941 at 554.207 kb on - strand, within H281DRAFT_02941 at 554.321 kb on - strand, within H281DRAFT_02941
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 551,505 - +0.9 551,655 - +1.3 551,739 + +0.1 551,917 + +0.0 551,917 + +0.4 551,990 + H281DRAFT_02939 0.54 -1.1 551,991 - H281DRAFT_02939 0.54 +2.9 553,095 + H281DRAFT_02940 0.71 -0.8 553,317 + +0.9 553,317 + -0.1 553,318 - +0.0 553,372 - +0.3 553,534 + H281DRAFT_02941 0.12 -0.1 554,206 + H281DRAFT_02941 0.69 -0.8 554,207 - H281DRAFT_02941 0.69 +0.6 554,321 - H281DRAFT_02941 0.79 +1.4
Or see this region's nucleotide sequence