Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02789 and H281DRAFT_02790 are separated by 10 nucleotides H281DRAFT_02790 and H281DRAFT_02791 are separated by 204 nucleotides H281DRAFT_02791 and H281DRAFT_02794 are separated by 317 nucleotides
H281DRAFT_02789: H281DRAFT_02789 - hypothetical protein, at 378,997 to 379,515
_02789
H281DRAFT_02790: H281DRAFT_02790 - hypothetical protein, at 379,526 to 380,227
_02790
H281DRAFT_02791: H281DRAFT_02791 - apolipoprotein D and lipocalin family protein, at 380,432 to 381,004
_02791
H281DRAFT_02794: H281DRAFT_02794 - D-amino acid dehydrogenase small subunit (EC 1.4.99.1), at 381,322 to 382,533
_02794
Position (kb) 380
381
382 Strain fitness (log2 ratio) -2
-1
0
1 at 379.556 kb on + strand at 380.315 kb on - strand at 380.315 kb on - strand at 380.320 kb on - strand at 380.471 kb on - strand at 380.585 kb on + strand, within H281DRAFT_02791 at 380.660 kb on + strand, within H281DRAFT_02791 at 380.999 kb on - strand at 380.999 kb on - strand at 381.206 kb on + strand at 381.206 kb on + strand at 381.206 kb on + strand at 381.206 kb on + strand at 381.206 kb on + strand at 381.244 kb on + strand at 381.306 kb on + strand at 381.307 kb on - strand at 381.307 kb on - strand at 381.424 kb on + strand at 381.492 kb on + strand, within H281DRAFT_02794 at 381.740 kb on - strand, within H281DRAFT_02794 at 381.740 kb on - strand, within H281DRAFT_02794
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 379,556 + +0.9 380,315 - +0.0 380,315 - -0.2 380,320 - +0.5 380,471 - -0.6 380,585 + H281DRAFT_02791 0.27 +1.1 380,660 + H281DRAFT_02791 0.40 +0.7 380,999 - -1.8 380,999 - -0.7 381,206 + -0.5 381,206 + -0.0 381,206 + -0.1 381,206 + +1.1 381,206 + -0.0 381,244 + +0.2 381,306 + -0.3 381,307 - -0.5 381,307 - +0.2 381,424 + +0.6 381,492 + H281DRAFT_02794 0.14 -1.0 381,740 - H281DRAFT_02794 0.34 -0.1 381,740 - H281DRAFT_02794 0.34 +0.1
Or see this region's nucleotide sequence