Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02661 and H281DRAFT_02662 are separated by 146 nucleotides H281DRAFT_02662 and H281DRAFT_02663 are separated by 71 nucleotides H281DRAFT_02663 and H281DRAFT_02664 overlap by 82 nucleotides H281DRAFT_02664 and H281DRAFT_02665 are separated by 15 nucleotides
H281DRAFT_02661: H281DRAFT_02661 - transcriptional regulator, AraC family with amidase-like domain, at 241,346 to 243,721
_02661
H281DRAFT_02662: H281DRAFT_02662 - Predicted xylanase/chitin deacetylase, at 243,868 to 244,770
_02662
H281DRAFT_02663: H281DRAFT_02663 - hypothetical protein, at 244,842 to 245,435
_02663
H281DRAFT_02664: H281DRAFT_02664 - hypothetical protein, at 245,354 to 245,521
_02664
H281DRAFT_02665: H281DRAFT_02665 - Outer membrane protein (porin), at 245,537 to 246,634
_02665
Position (kb) 243
244
245 Strain fitness (log2 ratio) -1
0
1 at 242.911 kb on - strand, within H281DRAFT_02661 at 243.003 kb on - strand, within H281DRAFT_02661 at 243.414 kb on - strand, within H281DRAFT_02661 at 243.428 kb on + strand at 243.666 kb on + strand at 243.724 kb on + strand at 243.812 kb on - strand at 244.563 kb on - strand, within H281DRAFT_02662 at 244.634 kb on - strand, within H281DRAFT_02662 at 245.513 kb on + strand at 245.539 kb on - strand at 245.546 kb on - strand at 245.680 kb on - strand, within H281DRAFT_02665
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 242,911 - H281DRAFT_02661 0.66 -1.0 243,003 - H281DRAFT_02661 0.70 +0.9 243,414 - H281DRAFT_02661 0.87 +0.3 243,428 + +0.6 243,666 + -0.3 243,724 + +0.7 243,812 - +0.4 244,563 - H281DRAFT_02662 0.77 +0.5 244,634 - H281DRAFT_02662 0.85 +1.0 245,513 + -0.2 245,539 - +0.3 245,546 - +0.6 245,680 - H281DRAFT_02665 0.13 +0.1
Or see this region's nucleotide sequence