Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02344 and H281DRAFT_02345 are separated by 153 nucleotides H281DRAFT_02345 and H281DRAFT_02346 are separated by 22 nucleotides H281DRAFT_02346 and H281DRAFT_02347 overlap by 4 nucleotides
H281DRAFT_02344: H281DRAFT_02344 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 502,290 to 503,891
_02344
H281DRAFT_02345: H281DRAFT_02345 - type II secretion system protein N (GspN), at 504,045 to 504,824
_02345
H281DRAFT_02346: H281DRAFT_02346 - general secretion pathway protein M, at 504,847 to 505,350
_02346
H281DRAFT_02347: H281DRAFT_02347 - general secretion pathway protein L, at 505,347 to 506,747
_02347
Position (kb) 504
505
506 Strain fitness (log2 ratio) -1
0
1
2 at 503.889 kb on + strand at 503.889 kb on + strand at 503.890 kb on - strand at 503.890 kb on - strand at 503.890 kb on - strand at 503.890 kb on - strand at 503.930 kb on + strand at 503.951 kb on + strand at 503.952 kb on - strand at 503.977 kb on + strand at 504.008 kb on + strand at 504.008 kb on + strand at 504.008 kb on + strand at 504.009 kb on - strand at 504.009 kb on - strand at 504.009 kb on - strand at 504.269 kb on - strand, within H281DRAFT_02345 at 504.269 kb on - strand, within H281DRAFT_02345 at 504.429 kb on + strand, within H281DRAFT_02345 at 504.429 kb on + strand, within H281DRAFT_02345 at 504.450 kb on + strand, within H281DRAFT_02345 at 504.451 kb on - strand, within H281DRAFT_02345 at 504.451 kb on - strand, within H281DRAFT_02345 at 504.498 kb on - strand, within H281DRAFT_02345 at 504.817 kb on + strand at 504.818 kb on - strand at 504.818 kb on - strand at 504.818 kb on - strand at 504.905 kb on - strand, within H281DRAFT_02346 at 504.905 kb on - strand, within H281DRAFT_02346 at 505.310 kb on + strand at 505.464 kb on - strand at 505.464 kb on - strand at 505.486 kb on + strand at 505.486 kb on + strand at 505.487 kb on - strand, within H281DRAFT_02347 at 505.982 kb on + strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand, within H281DRAFT_02347 at 505.983 kb on - strand at 505.984 kb on + strand, within H281DRAFT_02347 at 505.984 kb on + strand, within H281DRAFT_02347 at 505.984 kb on + strand, within H281DRAFT_02347 at 505.984 kb on + strand, within H281DRAFT_02347 at 505.984 kb on + strand, within H281DRAFT_02347 at 505.984 kb on + strand, within H281DRAFT_02347 at 505.985 kb on - strand, within H281DRAFT_02347
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 503,889 + +0.5 503,889 + -0.7 503,890 - +1.3 503,890 - -0.8 503,890 - +1.3 503,890 - +1.1 503,930 + -0.2 503,951 + +0.9 503,952 - -0.3 503,977 + +0.1 504,008 + +0.6 504,008 + +0.2 504,008 + +0.1 504,009 - -0.5 504,009 - -0.7 504,009 - +0.4 504,269 - H281DRAFT_02345 0.29 -0.9 504,269 - H281DRAFT_02345 0.29 +0.2 504,429 + H281DRAFT_02345 0.49 +0.3 504,429 + H281DRAFT_02345 0.49 +2.4 504,450 + H281DRAFT_02345 0.52 -0.6 504,451 - H281DRAFT_02345 0.52 +0.0 504,451 - H281DRAFT_02345 0.52 +0.7 504,498 - H281DRAFT_02345 0.58 +0.0 504,817 + -0.1 504,818 - +0.2 504,818 - +0.2 504,818 - +0.2 504,905 - H281DRAFT_02346 0.12 +0.6 504,905 - H281DRAFT_02346 0.12 +0.6 505,310 + +0.7 505,464 - +0.5 505,464 - +0.7 505,486 + +2.6 505,486 + +0.3 505,487 - H281DRAFT_02347 0.10 -0.1 505,982 + H281DRAFT_02347 0.45 -0.3 505,983 - H281DRAFT_02347 0.45 +1.9 505,983 - H281DRAFT_02347 0.45 +0.9 505,983 - H281DRAFT_02347 0.45 +0.6 505,983 - H281DRAFT_02347 0.45 +0.4 505,983 - H281DRAFT_02347 0.45 +0.5 505,983 - H281DRAFT_02347 0.45 +0.1 505,983 - H281DRAFT_02347 0.45 -0.2 505,983 - H281DRAFT_02347 0.45 +0.7 505,983 - +1.6 505,984 + H281DRAFT_02347 0.45 +0.2 505,984 + H281DRAFT_02347 0.45 +0.7 505,984 + H281DRAFT_02347 0.45 +0.4 505,984 + H281DRAFT_02347 0.45 +0.2 505,984 + H281DRAFT_02347 0.45 +1.3 505,984 + H281DRAFT_02347 0.45 -0.2 505,985 - H281DRAFT_02347 0.46 +0.4
Or see this region's nucleotide sequence