Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02274 and H281DRAFT_02275 overlap by 23 nucleotides H281DRAFT_02275 and H281DRAFT_02276 overlap by 4 nucleotides H281DRAFT_02276 and H281DRAFT_02277 are separated by 114 nucleotides H281DRAFT_02277 and H281DRAFT_02278 are separated by 236 nucleotides
H281DRAFT_02274: H281DRAFT_02274 - Site-specific DNA recombinase, at 419,368 to 420,882
_02274
H281DRAFT_02275: H281DRAFT_02275 - chromosome partitioning protein, ParB family, at 420,860 to 421,774
_02275
H281DRAFT_02276: H281DRAFT_02276 - ParB-like nuclease domain-containing protein, at 421,771 to 422,670
_02276
H281DRAFT_02277: H281DRAFT_02277 - hypothetical protein, at 422,785 to 423,126
_02277
H281DRAFT_02278: H281DRAFT_02278 - Protein of unknown function (DUF3296), at 423,363 to 424,607
_02278
Position (kb) 421
422
423 Strain fitness (log2 ratio) -2
-1
0
1 at 420.877 kb on - strand at 421.132 kb on + strand, within H281DRAFT_02275 at 421.133 kb on - strand, within H281DRAFT_02275 at 421.201 kb on + strand, within H281DRAFT_02275 at 421.250 kb on + strand, within H281DRAFT_02275 at 421.252 kb on + strand, within H281DRAFT_02275 at 421.253 kb on - strand, within H281DRAFT_02275 at 421.253 kb on - strand, within H281DRAFT_02275 at 421.253 kb on - strand, within H281DRAFT_02275 at 421.295 kb on + strand, within H281DRAFT_02275 at 421.296 kb on - strand, within H281DRAFT_02275 at 421.296 kb on - strand, within H281DRAFT_02275 at 421.296 kb on - strand, within H281DRAFT_02275 at 421.297 kb on + strand, within H281DRAFT_02275 at 421.364 kb on - strand, within H281DRAFT_02275 at 421.368 kb on + strand, within H281DRAFT_02275 at 421.440 kb on - strand, within H281DRAFT_02275 at 421.496 kb on - strand, within H281DRAFT_02275 at 421.520 kb on + strand, within H281DRAFT_02275 at 421.521 kb on - strand, within H281DRAFT_02275 at 421.521 kb on - strand, within H281DRAFT_02275 at 421.740 kb on + strand at 421.750 kb on + strand at 421.751 kb on - strand at 421.914 kb on - strand, within H281DRAFT_02276 at 422.271 kb on - strand, within H281DRAFT_02276 at 422.347 kb on + strand, within H281DRAFT_02276 at 422.347 kb on + strand, within H281DRAFT_02276 at 422.348 kb on - strand at 422.348 kb on - strand, within H281DRAFT_02276 at 422.500 kb on - strand, within H281DRAFT_02276 at 422.647 kb on - strand at 422.668 kb on + strand at 422.712 kb on + strand at 422.713 kb on - strand at 422.713 kb on - strand at 422.770 kb on + strand at 423.120 kb on + strand at 423.120 kb on + strand at 423.164 kb on + strand at 423.164 kb on + strand at 423.164 kb on + strand at 423.324 kb on + strand at 423.324 kb on + strand at 423.325 kb on - strand at 423.478 kb on + strand at 423.520 kb on + strand, within H281DRAFT_02278 at 423.521 kb on - strand, within H281DRAFT_02278 at 423.544 kb on + strand, within H281DRAFT_02278 at 423.561 kb on - strand, within H281DRAFT_02278 at 423.573 kb on - strand, within H281DRAFT_02278 at 423.601 kb on - strand, within H281DRAFT_02278
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 420,877 - +0.3 421,132 + H281DRAFT_02275 0.30 -1.2 421,133 - H281DRAFT_02275 0.30 -0.1 421,201 + H281DRAFT_02275 0.37 -0.6 421,250 + H281DRAFT_02275 0.43 +0.1 421,252 + H281DRAFT_02275 0.43 -0.1 421,253 - H281DRAFT_02275 0.43 +0.5 421,253 - H281DRAFT_02275 0.43 +0.0 421,253 - H281DRAFT_02275 0.43 +0.3 421,295 + H281DRAFT_02275 0.48 +0.3 421,296 - H281DRAFT_02275 0.48 -0.8 421,296 - H281DRAFT_02275 0.48 -0.8 421,296 - H281DRAFT_02275 0.48 +0.0 421,297 + H281DRAFT_02275 0.48 +0.9 421,364 - H281DRAFT_02275 0.55 -0.5 421,368 + H281DRAFT_02275 0.56 -0.9 421,440 - H281DRAFT_02275 0.63 -0.5 421,496 - H281DRAFT_02275 0.70 -0.1 421,520 + H281DRAFT_02275 0.72 -0.0 421,521 - H281DRAFT_02275 0.72 -0.4 421,521 - H281DRAFT_02275 0.72 -0.9 421,740 + +0.7 421,750 + -0.0 421,751 - -0.4 421,914 - H281DRAFT_02276 0.16 +0.5 422,271 - H281DRAFT_02276 0.56 -0.4 422,347 + H281DRAFT_02276 0.64 -0.3 422,347 + H281DRAFT_02276 0.64 -0.5 422,348 - +0.1 422,348 - H281DRAFT_02276 0.64 -0.5 422,500 - H281DRAFT_02276 0.81 -0.3 422,647 - -0.8 422,668 + +0.3 422,712 + -0.1 422,713 - -0.1 422,713 - +0.1 422,770 + -0.2 423,120 + +0.2 423,120 + +0.2 423,164 + +1.5 423,164 + +0.2 423,164 + -0.1 423,324 + +0.5 423,324 + -0.7 423,325 - -0.5 423,478 + +0.3 423,520 + H281DRAFT_02278 0.13 -2.3 423,521 - H281DRAFT_02278 0.13 +0.2 423,544 + H281DRAFT_02278 0.15 +0.3 423,561 - H281DRAFT_02278 0.16 -0.9 423,573 - H281DRAFT_02278 0.17 -1.8 423,601 - H281DRAFT_02278 0.19 -0.5
Or see this region's nucleotide sequence