Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02272 and H281DRAFT_02273 are separated by 601 nucleotides H281DRAFT_02273 and H281DRAFT_02274 are separated by 173 nucleotides
H281DRAFT_02272: H281DRAFT_02272 - Antitoxin component YwqK of the YwqJK toxin-antitoxin module, at 417,163 to 418,218
_02272
H281DRAFT_02273: H281DRAFT_02273 - hypothetical protein, at 418,820 to 419,194
_02273
H281DRAFT_02274: H281DRAFT_02274 - Site-specific DNA recombinase, at 419,368 to 420,882
_02274
Position (kb) 418
419
420 Strain fitness (log2 ratio) -2
-1
0
1
2 at 417.893 kb on - strand, within H281DRAFT_02272 at 417.901 kb on + strand, within H281DRAFT_02272 at 417.901 kb on + strand, within H281DRAFT_02272 at 417.961 kb on + strand, within H281DRAFT_02272 at 417.962 kb on - strand, within H281DRAFT_02272 at 417.973 kb on + strand, within H281DRAFT_02272 at 417.974 kb on - strand, within H281DRAFT_02272 at 417.993 kb on - strand, within H281DRAFT_02272 at 418.031 kb on + strand, within H281DRAFT_02272 at 418.031 kb on + strand, within H281DRAFT_02272 at 418.032 kb on - strand, within H281DRAFT_02272 at 418.032 kb on - strand, within H281DRAFT_02272 at 418.061 kb on - strand, within H281DRAFT_02272 at 418.093 kb on + strand, within H281DRAFT_02272 at 418.094 kb on - strand, within H281DRAFT_02272 at 418.213 kb on - strand at 418.277 kb on + strand at 418.475 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.572 kb on + strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.573 kb on - strand at 418.645 kb on + strand at 418.646 kb on - strand at 418.646 kb on - strand at 418.648 kb on + strand at 418.807 kb on - strand at 418.859 kb on - strand, within H281DRAFT_02273 at 418.859 kb on - strand, within H281DRAFT_02273 at 418.985 kb on - strand, within H281DRAFT_02273 at 418.992 kb on - strand, within H281DRAFT_02273 at 418.992 kb on - strand, within H281DRAFT_02273 at 419.036 kb on - strand, within H281DRAFT_02273 at 419.213 kb on + strand at 419.214 kb on - strand at 419.214 kb on - strand at 419.215 kb on + strand at 419.215 kb on + strand at 419.216 kb on - strand at 419.230 kb on + strand at 419.230 kb on + strand at 419.231 kb on - strand at 419.360 kb on - strand at 419.367 kb on + strand at 419.367 kb on + strand at 419.367 kb on + strand at 419.367 kb on + strand at 419.367 kb on + strand at 419.368 kb on - strand at 419.389 kb on + strand at 419.459 kb on + strand at 419.461 kb on + strand at 419.461 kb on + strand at 419.461 kb on + strand at 419.462 kb on - strand at 419.551 kb on + strand, within H281DRAFT_02274 at 419.551 kb on + strand, within H281DRAFT_02274 at 419.552 kb on - strand, within H281DRAFT_02274 at 419.577 kb on - strand, within H281DRAFT_02274 at 419.660 kb on - strand, within H281DRAFT_02274 at 419.660 kb on - strand, within H281DRAFT_02274 at 419.709 kb on - strand, within H281DRAFT_02274 at 419.725 kb on - strand, within H281DRAFT_02274 at 419.789 kb on + strand, within H281DRAFT_02274 at 419.789 kb on + strand, within H281DRAFT_02274 at 419.790 kb on - strand, within H281DRAFT_02274 at 419.790 kb on - strand, within H281DRAFT_02274 at 419.790 kb on - strand at 419.790 kb on - strand, within H281DRAFT_02274 at 419.866 kb on - strand, within H281DRAFT_02274 at 419.954 kb on + strand, within H281DRAFT_02274 at 419.964 kb on - strand, within H281DRAFT_02274 at 419.965 kb on + strand, within H281DRAFT_02274 at 419.965 kb on + strand, within H281DRAFT_02274 at 419.966 kb on - strand, within H281DRAFT_02274 at 419.966 kb on - strand, within H281DRAFT_02274 at 419.966 kb on - strand, within H281DRAFT_02274 at 419.966 kb on - strand, within H281DRAFT_02274 at 420.083 kb on + strand, within H281DRAFT_02274 at 420.084 kb on - strand, within H281DRAFT_02274 at 420.084 kb on - strand, within H281DRAFT_02274 at 420.097 kb on + strand, within H281DRAFT_02274 at 420.097 kb on + strand at 420.097 kb on + strand, within H281DRAFT_02274 at 420.097 kb on + strand, within H281DRAFT_02274 at 420.097 kb on + strand, within H281DRAFT_02274 at 420.097 kb on + strand, within H281DRAFT_02274 at 420.098 kb on - strand, within H281DRAFT_02274 at 420.098 kb on - strand, within H281DRAFT_02274
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 417,893 - H281DRAFT_02272 0.69 +0.5 417,901 + H281DRAFT_02272 0.70 -2.1 417,901 + H281DRAFT_02272 0.70 -0.7 417,961 + H281DRAFT_02272 0.76 +1.1 417,962 - H281DRAFT_02272 0.76 -0.7 417,973 + H281DRAFT_02272 0.77 +0.0 417,974 - H281DRAFT_02272 0.77 +0.1 417,993 - H281DRAFT_02272 0.79 -0.5 418,031 + H281DRAFT_02272 0.82 +0.1 418,031 + H281DRAFT_02272 0.82 -0.4 418,032 - H281DRAFT_02272 0.82 -0.4 418,032 - H281DRAFT_02272 0.82 +0.4 418,061 - H281DRAFT_02272 0.85 -1.2 418,093 + H281DRAFT_02272 0.88 -0.2 418,094 - H281DRAFT_02272 0.88 -0.5 418,213 - -0.2 418,277 + -0.2 418,475 + +0.3 418,572 + -0.2 418,572 + -0.9 418,572 + -0.1 418,572 + -0.6 418,572 + +0.3 418,572 + -0.7 418,572 + -1.9 418,572 + +0.3 418,572 + +2.1 418,572 + -0.8 418,572 + -0.1 418,572 + +0.7 418,572 + -1.1 418,572 + -0.2 418,572 + -0.5 418,572 + -0.9 418,572 + +0.7 418,573 - -0.5 418,573 - -0.1 418,573 - +0.3 418,573 - +0.6 418,573 - +1.1 418,573 - -0.1 418,573 - +0.6 418,645 + -0.1 418,646 - -0.3 418,646 - +0.0 418,648 + +0.6 418,807 - +0.6 418,859 - H281DRAFT_02273 0.10 +0.2 418,859 - H281DRAFT_02273 0.10 -0.1 418,985 - H281DRAFT_02273 0.44 -0.6 418,992 - H281DRAFT_02273 0.46 -0.6 418,992 - H281DRAFT_02273 0.46 -0.8 419,036 - H281DRAFT_02273 0.58 -0.3 419,213 + +0.0 419,214 - +0.2 419,214 - -0.9 419,215 + +0.4 419,215 + +0.4 419,216 - -0.9 419,230 + -0.8 419,230 + +0.1 419,231 - -1.1 419,360 - -0.7 419,367 + -0.3 419,367 + +0.3 419,367 + +0.5 419,367 + -0.3 419,367 + -1.2 419,368 - +0.1 419,389 + -0.2 419,459 + +0.3 419,461 + +1.5 419,461 + -0.2 419,461 + -1.7 419,462 - +0.3 419,551 + H281DRAFT_02274 0.12 +0.8 419,551 + H281DRAFT_02274 0.12 -0.9 419,552 - H281DRAFT_02274 0.12 +1.0 419,577 - H281DRAFT_02274 0.14 -0.8 419,660 - H281DRAFT_02274 0.19 -0.1 419,660 - H281DRAFT_02274 0.19 -0.1 419,709 - H281DRAFT_02274 0.23 -1.1 419,725 - H281DRAFT_02274 0.24 -0.1 419,789 + H281DRAFT_02274 0.28 +0.5 419,789 + H281DRAFT_02274 0.28 +0.9 419,790 - H281DRAFT_02274 0.28 -0.0 419,790 - H281DRAFT_02274 0.28 -0.4 419,790 - +2.1 419,790 - H281DRAFT_02274 0.28 -0.3 419,866 - H281DRAFT_02274 0.33 -0.2 419,954 + H281DRAFT_02274 0.39 +0.9 419,964 - H281DRAFT_02274 0.39 -0.1 419,965 + H281DRAFT_02274 0.39 -1.3 419,965 + H281DRAFT_02274 0.39 -0.5 419,966 - H281DRAFT_02274 0.39 +0.2 419,966 - H281DRAFT_02274 0.39 +0.1 419,966 - H281DRAFT_02274 0.39 +0.1 419,966 - H281DRAFT_02274 0.39 -1.2 420,083 + H281DRAFT_02274 0.47 -0.9 420,084 - H281DRAFT_02274 0.47 -0.0 420,084 - H281DRAFT_02274 0.47 -0.2 420,097 + H281DRAFT_02274 0.48 +0.5 420,097 + +1.1 420,097 + H281DRAFT_02274 0.48 +0.1 420,097 + H281DRAFT_02274 0.48 +0.5 420,097 + H281DRAFT_02274 0.48 -0.3 420,097 + H281DRAFT_02274 0.48 -0.4 420,098 - H281DRAFT_02274 0.48 -0.5 420,098 - H281DRAFT_02274 0.48 -0.1
Or see this region's nucleotide sequence