Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02204 and H281DRAFT_02205 are separated by 594 nucleotides H281DRAFT_02205 and H281DRAFT_02206 are separated by 319 nucleotides H281DRAFT_02206 and H281DRAFT_02207 are separated by 9 nucleotides
H281DRAFT_02204: H281DRAFT_02204 - GTPase, G3E family, at 345,520 to 346,617
_02204
H281DRAFT_02205: H281DRAFT_02205 - transcriptional regulator, TraR/DksA family, at 347,212 to 347,631
_02205
H281DRAFT_02206: H281DRAFT_02206 - HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B, at 347,951 to 348,487
_02206
H281DRAFT_02207: H281DRAFT_02207 - ATP-dependent HslUV protease ATP-binding subunit HslU, at 348,497 to 349,843
_02207
Position (kb) 347
348 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 346.429 kb on + strand, within H281DRAFT_02204 at 346.430 kb on - strand, within H281DRAFT_02204 at 346.444 kb on + strand, within H281DRAFT_02204 at 346.445 kb on - strand, within H281DRAFT_02204 at 346.445 kb on - strand, within H281DRAFT_02204 at 346.445 kb on - strand, within H281DRAFT_02204 at 346.445 kb on - strand, within H281DRAFT_02204 at 346.587 kb on + strand at 346.587 kb on + strand at 346.588 kb on - strand at 346.588 kb on - strand at 346.588 kb on - strand at 346.642 kb on + strand at 346.642 kb on + strand at 346.736 kb on - strand at 346.738 kb on + strand at 346.738 kb on + strand at 346.739 kb on - strand at 346.779 kb on - strand at 346.780 kb on + strand at 346.847 kb on + strand at 346.848 kb on - strand at 346.848 kb on - strand at 346.852 kb on + strand at 346.852 kb on + strand at 346.852 kb on + strand at 346.853 kb on - strand at 346.853 kb on - strand at 346.853 kb on - strand at 347.005 kb on + strand at 347.006 kb on - strand at 347.006 kb on - strand at 347.062 kb on - strand at 347.174 kb on + strand at 347.174 kb on + strand at 347.174 kb on + strand at 347.269 kb on + strand, within H281DRAFT_02205 at 347.270 kb on - strand, within H281DRAFT_02205 at 347.798 kb on + strand at 347.799 kb on - strand at 347.799 kb on - strand at 347.838 kb on + strand at 347.838 kb on + strand at 347.838 kb on + strand at 347.839 kb on - strand at 347.839 kb on - strand at 347.863 kb on - strand at 347.951 kb on - strand at 347.951 kb on - strand at 348.080 kb on + strand, within H281DRAFT_02206 at 348.080 kb on + strand, within H281DRAFT_02206 at 348.080 kb on + strand, within H281DRAFT_02206 at 348.080 kb on + strand, within H281DRAFT_02206 at 348.082 kb on + strand, within H281DRAFT_02206 at 348.181 kb on + strand, within H281DRAFT_02206 at 348.350 kb on + strand, within H281DRAFT_02206 at 348.350 kb on + strand, within H281DRAFT_02206 at 348.350 kb on + strand, within H281DRAFT_02206 at 348.350 kb on + strand, within H281DRAFT_02206 at 348.351 kb on - strand, within H281DRAFT_02206 at 348.485 kb on + strand at 348.486 kb on - strand at 348.544 kb on + strand at 348.544 kb on + strand at 348.544 kb on + strand at 348.544 kb on + strand at 348.544 kb on + strand at 348.544 kb on + strand at 348.545 kb on - strand at 348.545 kb on - strand at 348.545 kb on - strand at 348.615 kb on + strand at 348.615 kb on + strand at 348.615 kb on + strand at 348.615 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 346,429 + H281DRAFT_02204 0.83 -1.3 346,430 - H281DRAFT_02204 0.83 +0.1 346,444 + H281DRAFT_02204 0.84 -0.6 346,445 - H281DRAFT_02204 0.84 -1.4 346,445 - H281DRAFT_02204 0.84 -0.6 346,445 - H281DRAFT_02204 0.84 -0.3 346,445 - H281DRAFT_02204 0.84 -0.8 346,587 + +0.6 346,587 + -0.0 346,588 - +0.1 346,588 - -0.2 346,588 - -0.5 346,642 + -3.2 346,642 + -1.4 346,736 - +0.2 346,738 + -0.0 346,738 + +0.5 346,739 - +1.1 346,779 - -0.3 346,780 + -0.2 346,847 + +0.8 346,848 - -0.1 346,848 - -0.2 346,852 + -1.1 346,852 + -0.0 346,852 + +0.2 346,853 - -1.9 346,853 - -3.0 346,853 - -4.7 347,005 + -0.5 347,006 - -0.9 347,006 - -3.6 347,062 - -3.1 347,174 + +0.1 347,174 + +0.3 347,174 + -1.5 347,269 + H281DRAFT_02205 0.14 -2.1 347,270 - H281DRAFT_02205 0.14 -3.8 347,798 + -0.2 347,799 - +0.3 347,799 - -0.6 347,838 + +0.7 347,838 + -0.1 347,838 + +0.7 347,839 - +0.1 347,839 - -0.7 347,863 - -0.9 347,951 - -0.2 347,951 - +0.2 348,080 + H281DRAFT_02206 0.24 -1.0 348,080 + H281DRAFT_02206 0.24 -1.0 348,080 + H281DRAFT_02206 0.24 +0.5 348,080 + H281DRAFT_02206 0.24 -0.3 348,082 + H281DRAFT_02206 0.24 +0.2 348,181 + H281DRAFT_02206 0.43 +0.5 348,350 + H281DRAFT_02206 0.74 +0.1 348,350 + H281DRAFT_02206 0.74 +0.2 348,350 + H281DRAFT_02206 0.74 +0.3 348,350 + H281DRAFT_02206 0.74 -0.9 348,351 - H281DRAFT_02206 0.74 +1.1 348,485 + -0.8 348,486 - -0.3 348,544 + -0.3 348,544 + -0.9 348,544 + -0.1 348,544 + -0.9 348,544 + +0.2 348,544 + +0.1 348,545 - +1.5 348,545 - -0.0 348,545 - +0.5 348,615 + -0.6 348,615 + -0.3 348,615 + -1.5 348,615 + +0.6
Or see this region's nucleotide sequence