Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02143 and H281DRAFT_02144 are separated by 96 nucleotides H281DRAFT_02144 and H281DRAFT_02145 are separated by 281 nucleotides H281DRAFT_02145 and H281DRAFT_02146 are separated by 349 nucleotides
H281DRAFT_02143: H281DRAFT_02143 - hypothetical protein, at 283,981 to 285,534
_02143
H281DRAFT_02144: H281DRAFT_02144 - hypothetical protein, at 285,631 to 287,049
_02144
H281DRAFT_02145: H281DRAFT_02145 - hypothetical protein, at 287,331 to 287,441
_02145
H281DRAFT_02146: H281DRAFT_02146 - Integrase, at 287,791 to 289,005
_02146
Position (kb) 285
286
287
288 Strain fitness (log2 ratio) -2
-1
0
1
2 at 284.640 kb on - strand, within H281DRAFT_02143 at 284.741 kb on - strand, within H281DRAFT_02143 at 284.788 kb on + strand, within H281DRAFT_02143 at 284.789 kb on - strand, within H281DRAFT_02143 at 284.824 kb on + strand, within H281DRAFT_02143 at 284.825 kb on - strand, within H281DRAFT_02143 at 284.914 kb on - strand, within H281DRAFT_02143 at 284.940 kb on + strand, within H281DRAFT_02143 at 284.941 kb on - strand, within H281DRAFT_02143 at 284.941 kb on - strand, within H281DRAFT_02143 at 284.977 kb on + strand, within H281DRAFT_02143 at 285.084 kb on + strand, within H281DRAFT_02143 at 285.109 kb on + strand, within H281DRAFT_02143 at 285.115 kb on + strand, within H281DRAFT_02143 at 285.115 kb on + strand, within H281DRAFT_02143 at 285.116 kb on - strand, within H281DRAFT_02143 at 285.118 kb on + strand, within H281DRAFT_02143 at 285.119 kb on - strand, within H281DRAFT_02143 at 285.138 kb on + strand, within H281DRAFT_02143 at 285.145 kb on + strand, within H281DRAFT_02143 at 285.145 kb on + strand, within H281DRAFT_02143 at 285.146 kb on - strand, within H281DRAFT_02143 at 285.172 kb on + strand, within H281DRAFT_02143 at 285.283 kb on + strand, within H281DRAFT_02143 at 285.283 kb on + strand, within H281DRAFT_02143 at 285.284 kb on - strand, within H281DRAFT_02143 at 285.391 kb on + strand at 285.391 kb on + strand at 285.460 kb on + strand at 285.461 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.485 kb on - strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.598 kb on + strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.599 kb on - strand at 285.618 kb on + strand at 285.618 kb on + strand at 285.618 kb on + strand at 285.637 kb on - strand at 285.637 kb on - strand at 285.637 kb on - strand at 285.712 kb on + strand at 285.718 kb on + strand at 285.719 kb on - strand at 285.736 kb on + strand at 285.737 kb on - strand at 285.737 kb on - strand at 285.801 kb on + strand, within H281DRAFT_02144 at 285.813 kb on + strand, within H281DRAFT_02144 at 285.813 kb on + strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.896 kb on - strand, within H281DRAFT_02144 at 285.963 kb on + strand, within H281DRAFT_02144 at 285.965 kb on + strand, within H281DRAFT_02144 at 286.004 kb on - strand, within H281DRAFT_02144 at 286.004 kb on - strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.212 kb on + strand, within H281DRAFT_02144 at 286.213 kb on - strand, within H281DRAFT_02144 at 286.213 kb on - strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.230 kb on + strand, within H281DRAFT_02144 at 286.231 kb on - strand, within H281DRAFT_02144 at 286.234 kb on + strand, within H281DRAFT_02144 at 286.234 kb on + strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.235 kb on - strand, within H281DRAFT_02144 at 286.289 kb on + strand, within H281DRAFT_02144 at 286.289 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.684 kb on + strand, within H281DRAFT_02144 at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.962 kb on - strand at 287.049 kb on + strand at 287.050 kb on - strand at 287.050 kb on - strand at 287.107 kb on + strand at 287.141 kb on + strand at 287.163 kb on + strand at 287.264 kb on - strand at 287.304 kb on + strand at 287.320 kb on - strand at 287.393 kb on - strand, within H281DRAFT_02145 at 287.559 kb on + strand at 287.559 kb on + strand at 287.559 kb on + strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.583 kb on + strand at 287.653 kb on + strand at 287.653 kb on + strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.739 kb on + strand at 287.740 kb on - strand at 287.775 kb on + strand at 287.850 kb on - strand at 287.850 kb on - strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.913 kb on + strand, within H281DRAFT_02146 at 287.914 kb on - strand, within H281DRAFT_02146
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 284,640 - H281DRAFT_02143 0.42 -0.0 284,741 - H281DRAFT_02143 0.49 -0.6 284,788 + H281DRAFT_02143 0.52 -0.3 284,789 - H281DRAFT_02143 0.52 +0.4 284,824 + H281DRAFT_02143 0.54 -1.3 284,825 - H281DRAFT_02143 0.54 -0.0 284,914 - H281DRAFT_02143 0.60 -0.1 284,940 + H281DRAFT_02143 0.62 +0.2 284,941 - H281DRAFT_02143 0.62 +0.2 284,941 - H281DRAFT_02143 0.62 -0.1 284,977 + H281DRAFT_02143 0.64 +0.6 285,084 + H281DRAFT_02143 0.71 +0.1 285,109 + H281DRAFT_02143 0.73 +0.3 285,115 + H281DRAFT_02143 0.73 -0.4 285,115 + H281DRAFT_02143 0.73 -0.5 285,116 - H281DRAFT_02143 0.73 -0.0 285,118 + H281DRAFT_02143 0.73 +0.1 285,119 - H281DRAFT_02143 0.73 -0.3 285,138 + H281DRAFT_02143 0.74 -1.1 285,145 + H281DRAFT_02143 0.75 +0.7 285,145 + H281DRAFT_02143 0.75 -0.2 285,146 - H281DRAFT_02143 0.75 -0.6 285,172 + H281DRAFT_02143 0.77 -0.1 285,283 + H281DRAFT_02143 0.84 +0.5 285,283 + H281DRAFT_02143 0.84 -0.2 285,284 - H281DRAFT_02143 0.84 +0.4 285,391 + +0.3 285,391 + +0.8 285,460 + -0.5 285,461 - +0.4 285,485 - -0.1 285,485 - +1.0 285,485 - -0.5 285,485 - +2.5 285,485 - +0.8 285,598 + -0.1 285,598 + -0.1 285,598 + -0.4 285,598 + -0.0 285,599 - +1.4 285,599 - -0.4 285,599 - +0.0 285,599 - +0.2 285,599 - +0.1 285,599 - -0.3 285,618 + -2.5 285,618 + -0.1 285,618 + -0.8 285,637 - -0.2 285,637 - +0.2 285,637 - -0.8 285,712 + -1.4 285,718 + -0.1 285,719 - +0.4 285,736 + -0.2 285,737 - -0.1 285,737 - -0.1 285,801 + H281DRAFT_02144 0.12 -0.0 285,813 + H281DRAFT_02144 0.13 +0.4 285,813 + H281DRAFT_02144 0.13 +0.2 285,896 - H281DRAFT_02144 0.19 +0.6 285,896 - H281DRAFT_02144 0.19 +0.0 285,896 - H281DRAFT_02144 0.19 +0.1 285,963 + H281DRAFT_02144 0.23 -0.4 285,965 + H281DRAFT_02144 0.24 -0.4 286,004 - H281DRAFT_02144 0.26 -0.4 286,004 - H281DRAFT_02144 0.26 +0.7 286,212 + H281DRAFT_02144 0.41 +0.3 286,212 + H281DRAFT_02144 0.41 +0.1 286,212 + H281DRAFT_02144 0.41 +1.0 286,212 + H281DRAFT_02144 0.41 -2.2 286,212 + H281DRAFT_02144 0.41 -0.1 286,213 - H281DRAFT_02144 0.41 +0.7 286,213 - H281DRAFT_02144 0.41 -0.1 286,230 + H281DRAFT_02144 0.42 +0.5 286,230 + H281DRAFT_02144 0.42 -0.5 286,230 + H281DRAFT_02144 0.42 +0.3 286,230 + H281DRAFT_02144 0.42 -0.6 286,231 - H281DRAFT_02144 0.42 -0.9 286,234 + H281DRAFT_02144 0.42 +0.7 286,234 + H281DRAFT_02144 0.42 +0.4 286,235 - H281DRAFT_02144 0.43 -1.0 286,235 - H281DRAFT_02144 0.43 -0.4 286,235 - H281DRAFT_02144 0.43 +0.2 286,235 - H281DRAFT_02144 0.43 +0.6 286,289 + H281DRAFT_02144 0.46 +0.1 286,289 + H281DRAFT_02144 0.46 +0.7 286,380 + H281DRAFT_02144 0.53 +0.2 286,380 + H281DRAFT_02144 0.53 -0.3 286,380 + H281DRAFT_02144 0.53 -1.2 286,381 - H281DRAFT_02144 0.53 +0.2 286,381 - H281DRAFT_02144 0.53 -1.4 286,684 + H281DRAFT_02144 0.74 -0.2 286,909 + -0.5 286,909 + -0.4 286,909 + +0.4 286,909 + +0.3 286,961 + -0.3 286,961 + +0.6 286,961 + -1.3 286,962 - -1.0 287,049 + -0.3 287,050 - +0.5 287,050 - -0.5 287,107 + +1.2 287,141 + -0.1 287,163 + +1.7 287,264 - -0.4 287,304 + -0.3 287,320 - -0.7 287,393 - H281DRAFT_02145 0.56 -0.6 287,559 + -0.2 287,559 + +1.0 287,559 + -0.7 287,560 - -0.1 287,560 - -0.2 287,560 - +0.2 287,560 - -0.2 287,560 - +0.4 287,583 + -0.2 287,653 + +0.4 287,653 + -0.3 287,654 - +0.5 287,654 - -0.6 287,654 - -0.1 287,654 - +0.5 287,654 - +0.3 287,654 - -1.0 287,654 - -0.4 287,654 - +0.1 287,662 - +0.6 287,662 - -0.2 287,662 - +1.0 287,739 + +0.7 287,740 - -0.4 287,775 + +1.6 287,850 - +0.3 287,850 - -0.4 287,906 + +0.7 287,906 + +1.1 287,906 + -0.6 287,907 - +0.3 287,907 - -0.0 287,907 - +0.0 287,913 + H281DRAFT_02146 0.10 +0.5 287,914 - H281DRAFT_02146 0.10 +2.0
Or see this region's nucleotide sequence