Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01797 and H281DRAFT_01798 are separated by 300 nucleotides H281DRAFT_01798 and H281DRAFT_01799 overlap by 1 nucleotides H281DRAFT_01799 and H281DRAFT_01800 are separated by 166 nucleotides
H281DRAFT_01797: H281DRAFT_01797 - 3',5'-cyclic AMP phosphodiesterase CpdA, at 697,827 to 698,774
_01797
H281DRAFT_01798: H281DRAFT_01798 - Transmembrane transcriptional regulator (anti-sigma factor RsiW), at 699,075 to 699,863
_01798
H281DRAFT_01799: H281DRAFT_01799 - RNA polymerase sigma-70 factor, ECF subfamily, at 699,863 to 700,402
_01799
H281DRAFT_01800: H281DRAFT_01800 - transcriptional regulator, LysR family, at 700,569 to 701,471
_01800
Position (kb) 699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 698.306 kb on - strand, within H281DRAFT_01797 at 698.733 kb on + strand at 698.774 kb on + strand at 698.838 kb on - strand at 699.051 kb on + strand at 699.188 kb on - strand at 699.401 kb on + strand, within H281DRAFT_01798 at 699.402 kb on - strand, within H281DRAFT_01798 at 699.746 kb on - strand, within H281DRAFT_01798 at 700.126 kb on + strand, within H281DRAFT_01799 at 700.312 kb on + strand, within H281DRAFT_01799 at 700.387 kb on + strand at 700.504 kb on - strand at 700.512 kb on - strand at 700.568 kb on - strand at 700.571 kb on - strand at 700.571 kb on - strand at 700.571 kb on - strand at 700.684 kb on + strand, within H281DRAFT_01800 at 700.742 kb on - strand, within H281DRAFT_01800
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 698,306 - H281DRAFT_01797 0.51 +0.0 698,733 + -0.3 698,774 + +0.3 698,838 - +1.1 699,051 + -0.5 699,188 - -1.5 699,401 + H281DRAFT_01798 0.41 -1.5 699,402 - H281DRAFT_01798 0.41 -3.3 699,746 - H281DRAFT_01798 0.85 -3.1 700,126 + H281DRAFT_01799 0.49 -0.7 700,312 + H281DRAFT_01799 0.83 +0.5 700,387 + +0.9 700,504 - -0.7 700,512 - +0.2 700,568 - +0.5 700,571 - -0.6 700,571 - +1.1 700,571 - +0.3 700,684 + H281DRAFT_01800 0.13 -1.0 700,742 - H281DRAFT_01800 0.19 -0.5
Or see this region's nucleotide sequence