Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01613 and H281DRAFT_01614 are separated by 278 nucleotides H281DRAFT_01614 and H281DRAFT_01615 are separated by 36 nucleotides H281DRAFT_01615 and H281DRAFT_01616 are separated by 180 nucleotides
H281DRAFT_01613: H281DRAFT_01613 - Phosphatidylglycerophosphate synthase, at 494,166 to 494,867
_01613
H281DRAFT_01614: H281DRAFT_01614 - hypothetical protein, at 495,146 to 495,604
_01614
H281DRAFT_01615: H281DRAFT_01615 - hypothetical protein, at 495,641 to 497,602
_01615
H281DRAFT_01616: H281DRAFT_01616 - hypothetical protein, at 497,783 to 498,343
_01616
Position (kb) 495
496
497
498 Strain fitness (log2 ratio) -2
-1
0
1
2 at 494.777 kb on + strand, within H281DRAFT_01613 at 494.778 kb on - strand, within H281DRAFT_01613 at 494.778 kb on - strand, within H281DRAFT_01613 at 494.841 kb on - strand at 494.878 kb on + strand at 494.878 kb on + strand at 494.878 kb on + strand at 494.880 kb on + strand at 494.881 kb on - strand at 494.883 kb on - strand at 494.964 kb on - strand at 494.964 kb on - strand at 494.964 kb on - strand at 495.075 kb on - strand at 495.101 kb on + strand at 495.101 kb on + strand at 495.102 kb on - strand at 495.187 kb on + strand at 495.188 kb on - strand at 495.188 kb on - strand at 495.516 kb on + strand, within H281DRAFT_01614 at 495.643 kb on - strand at 495.703 kb on + strand at 495.704 kb on - strand at 495.704 kb on - strand at 495.704 kb on - strand at 495.705 kb on + strand at 495.705 kb on + strand at 495.705 kb on + strand at 495.705 kb on + strand at 495.706 kb on - strand at 495.706 kb on - strand at 495.706 kb on - strand at 495.706 kb on - strand at 495.798 kb on + strand at 495.799 kb on - strand at 495.897 kb on + strand, within H281DRAFT_01615 at 496.093 kb on + strand, within H281DRAFT_01615 at 496.094 kb on - strand, within H281DRAFT_01615 at 496.094 kb on - strand, within H281DRAFT_01615 at 496.146 kb on + strand, within H281DRAFT_01615 at 496.242 kb on + strand, within H281DRAFT_01615 at 496.242 kb on + strand, within H281DRAFT_01615 at 496.243 kb on - strand, within H281DRAFT_01615 at 496.261 kb on + strand, within H281DRAFT_01615 at 496.320 kb on + strand, within H281DRAFT_01615 at 496.575 kb on + strand, within H281DRAFT_01615 at 496.575 kb on + strand, within H281DRAFT_01615 at 496.576 kb on - strand, within H281DRAFT_01615 at 496.716 kb on + strand, within H281DRAFT_01615 at 496.776 kb on + strand, within H281DRAFT_01615 at 496.777 kb on - strand, within H281DRAFT_01615 at 496.783 kb on - strand, within H281DRAFT_01615 at 496.853 kb on - strand, within H281DRAFT_01615 at 496.872 kb on + strand, within H281DRAFT_01615 at 496.952 kb on - strand, within H281DRAFT_01615 at 497.043 kb on + strand, within H281DRAFT_01615 at 497.044 kb on - strand, within H281DRAFT_01615 at 497.238 kb on + strand, within H281DRAFT_01615 at 497.239 kb on - strand, within H281DRAFT_01615 at 497.307 kb on + strand, within H281DRAFT_01615 at 497.611 kb on - strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.635 kb on + strand at 497.636 kb on - strand at 497.706 kb on + strand at 497.706 kb on + strand at 497.726 kb on - strand at 497.726 kb on - strand at 497.743 kb on + strand at 497.744 kb on - strand at 497.910 kb on + strand, within H281DRAFT_01616 at 497.984 kb on + strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 497.985 kb on - strand, within H281DRAFT_01616 at 498.380 kb on + strand at 498.380 kb on + strand at 498.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 494,777 + H281DRAFT_01613 0.87 +1.9 494,778 - H281DRAFT_01613 0.87 +0.2 494,778 - H281DRAFT_01613 0.87 +0.0 494,841 - +0.4 494,878 + +1.6 494,878 + +0.9 494,878 + +0.5 494,880 + +0.2 494,881 - -0.1 494,883 - -0.3 494,964 - -0.6 494,964 - -0.4 494,964 - +0.4 495,075 - +1.8 495,101 + -0.4 495,101 + +0.4 495,102 - +0.1 495,187 + +0.2 495,188 - -0.5 495,188 - +0.8 495,516 + H281DRAFT_01614 0.81 -0.1 495,643 - -0.3 495,703 + -0.3 495,704 - -0.3 495,704 - +0.1 495,704 - +1.0 495,705 + -0.1 495,705 + -0.1 495,705 + -0.0 495,705 + +0.2 495,706 - +1.4 495,706 - -0.5 495,706 - -0.0 495,706 - +0.1 495,798 + +0.8 495,799 - -0.4 495,897 + H281DRAFT_01615 0.13 -0.1 496,093 + H281DRAFT_01615 0.23 +0.2 496,094 - H281DRAFT_01615 0.23 +0.8 496,094 - H281DRAFT_01615 0.23 -0.5 496,146 + H281DRAFT_01615 0.26 -0.1 496,242 + H281DRAFT_01615 0.31 +0.1 496,242 + H281DRAFT_01615 0.31 -0.2 496,243 - H281DRAFT_01615 0.31 +0.7 496,261 + H281DRAFT_01615 0.32 -0.1 496,320 + H281DRAFT_01615 0.35 +0.2 496,575 + H281DRAFT_01615 0.48 +0.4 496,575 + H281DRAFT_01615 0.48 +1.4 496,576 - H281DRAFT_01615 0.48 +1.7 496,716 + H281DRAFT_01615 0.55 -0.4 496,776 + H281DRAFT_01615 0.58 +0.3 496,777 - H281DRAFT_01615 0.58 +0.9 496,783 - H281DRAFT_01615 0.58 -0.3 496,853 - H281DRAFT_01615 0.62 -0.2 496,872 + H281DRAFT_01615 0.63 -0.1 496,952 - H281DRAFT_01615 0.67 +0.1 497,043 + H281DRAFT_01615 0.71 -0.2 497,044 - H281DRAFT_01615 0.72 -0.5 497,238 + H281DRAFT_01615 0.81 -1.5 497,239 - H281DRAFT_01615 0.81 -1.9 497,307 + H281DRAFT_01615 0.85 +0.3 497,611 - -1.5 497,635 + -0.3 497,635 + +0.7 497,635 + +0.2 497,636 - +0.8 497,706 + -0.6 497,706 + +1.4 497,726 - +0.2 497,726 - +0.5 497,743 + -0.4 497,744 - +0.7 497,910 + H281DRAFT_01616 0.23 -1.2 497,984 + H281DRAFT_01616 0.36 +0.4 497,985 - H281DRAFT_01616 0.36 +0.3 497,985 - H281DRAFT_01616 0.36 -0.8 497,985 - H281DRAFT_01616 0.36 -0.8 498,380 + -0.3 498,380 + -0.6 498,557 - -1.2
Or see this region's nucleotide sequence