Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01557 and H281DRAFT_01558 are separated by 119 nucleotides H281DRAFT_01558 and H281DRAFT_01559 are separated by 23 nucleotides H281DRAFT_01559 and H281DRAFT_01560 are separated by 54 nucleotides
H281DRAFT_01557: H281DRAFT_01557 - transcriptional regulator, GntR family, at 429,285 to 430,697
_01557
H281DRAFT_01558: H281DRAFT_01558 - Cupin domain protein, at 430,817 to 431,233
_01558
H281DRAFT_01559: H281DRAFT_01559 - alkylhydroperoxidase AhpD family core domain-containing protein, at 431,257 to 431,712
_01559
H281DRAFT_01560: H281DRAFT_01560 - hypothetical protein, at 431,767 to 432,537
_01560
Position (kb) 430
431
432 Strain fitness (log2 ratio) -2
-1
0
1
2 at 429.886 kb on + strand, within H281DRAFT_01557 at 430.131 kb on + strand, within H281DRAFT_01557 at 430.229 kb on + strand at 430.463 kb on - strand, within H281DRAFT_01557 at 430.514 kb on + strand, within H281DRAFT_01557 at 430.514 kb on + strand, within H281DRAFT_01557 at 430.515 kb on - strand, within H281DRAFT_01557 at 430.515 kb on - strand, within H281DRAFT_01557 at 430.526 kb on - strand, within H281DRAFT_01557 at 430.585 kb on - strand at 430.613 kb on - strand at 430.649 kb on - strand at 430.692 kb on - strand at 430.696 kb on - strand at 430.734 kb on + strand at 430.739 kb on - strand at 430.793 kb on - strand at 430.793 kb on - strand at 431.026 kb on + strand, within H281DRAFT_01558 at 431.027 kb on - strand, within H281DRAFT_01558 at 431.027 kb on - strand, within H281DRAFT_01558 at 431.027 kb on - strand at 431.030 kb on + strand, within H281DRAFT_01558 at 431.031 kb on - strand, within H281DRAFT_01558 at 431.036 kb on + strand, within H281DRAFT_01558 at 431.037 kb on - strand, within H281DRAFT_01558 at 431.037 kb on - strand, within H281DRAFT_01558 at 431.238 kb on + strand at 431.371 kb on + strand, within H281DRAFT_01559 at 431.421 kb on + strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.581 kb on + strand, within H281DRAFT_01559 at 431.656 kb on + strand, within H281DRAFT_01559 at 431.657 kb on - strand, within H281DRAFT_01559 at 431.820 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 429,886 + H281DRAFT_01557 0.43 -0.4 430,131 + H281DRAFT_01557 0.60 -0.1 430,229 + -0.8 430,463 - H281DRAFT_01557 0.83 +0.5 430,514 + H281DRAFT_01557 0.87 -0.2 430,514 + H281DRAFT_01557 0.87 +0.6 430,515 - H281DRAFT_01557 0.87 -1.7 430,515 - H281DRAFT_01557 0.87 +0.2 430,526 - H281DRAFT_01557 0.88 -0.3 430,585 - -0.0 430,613 - -0.3 430,649 - -0.3 430,692 - -0.4 430,696 - -0.3 430,734 + -0.6 430,739 - -0.1 430,793 - +0.1 430,793 - +0.5 431,026 + H281DRAFT_01558 0.50 -1.0 431,027 - H281DRAFT_01558 0.50 -2.2 431,027 - H281DRAFT_01558 0.50 +1.1 431,027 - +2.1 431,030 + H281DRAFT_01558 0.51 +0.4 431,031 - H281DRAFT_01558 0.51 +0.2 431,036 + H281DRAFT_01558 0.53 -0.2 431,037 - H281DRAFT_01558 0.53 +1.4 431,037 - H281DRAFT_01558 0.53 -0.2 431,238 + -0.6 431,371 + H281DRAFT_01559 0.25 -0.2 431,421 + H281DRAFT_01559 0.36 +0.5 431,422 - H281DRAFT_01559 0.36 +0.0 431,422 - H281DRAFT_01559 0.36 +0.0 431,422 - H281DRAFT_01559 0.36 +0.4 431,581 + H281DRAFT_01559 0.71 -0.4 431,656 + H281DRAFT_01559 0.88 -0.4 431,657 - H281DRAFT_01559 0.88 -0.3 431,820 + +0.5
Or see this region's nucleotide sequence