Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01266 and H281DRAFT_01267 are separated by 78 nucleotides H281DRAFT_01267 and H281DRAFT_01268 are separated by 191 nucleotides H281DRAFT_01268 and H281DRAFT_01269 are separated by 104 nucleotides
H281DRAFT_01266: H281DRAFT_01266 - sarcosine oxidase subunit beta, at 100,079 to 101,266
_01266
H281DRAFT_01267: H281DRAFT_01267 - Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family, at 101,345 to 101,698
_01267
H281DRAFT_01268: H281DRAFT_01268 - RNA polymerase sigma-70 factor, ECF subfamily, at 101,890 to 102,771
_01268
H281DRAFT_01269: H281DRAFT_01269 - DNA-binding transcriptional regulator, LysR family, at 102,876 to 103,886
_01269
Position (kb) 101
102
103 Strain fitness (log2 ratio) -1
0
1 at 101.072 kb on + strand, within H281DRAFT_01266 at 101.072 kb on + strand, within H281DRAFT_01266 at 101.073 kb on - strand, within H281DRAFT_01266 at 101.075 kb on + strand, within H281DRAFT_01266 at 101.075 kb on + strand, within H281DRAFT_01266 at 101.075 kb on + strand, within H281DRAFT_01266 at 101.075 kb on + strand, within H281DRAFT_01266 at 101.109 kb on + strand, within H281DRAFT_01266 at 101.110 kb on - strand, within H281DRAFT_01266 at 101.264 kb on + strand at 101.381 kb on - strand, within H281DRAFT_01267 at 101.544 kb on + strand, within H281DRAFT_01267 at 101.544 kb on + strand, within H281DRAFT_01267 at 101.831 kb on + strand at 102.118 kb on + strand, within H281DRAFT_01268 at 102.121 kb on - strand, within H281DRAFT_01268 at 102.550 kb on - strand, within H281DRAFT_01268 at 102.603 kb on + strand, within H281DRAFT_01268 at 102.603 kb on + strand, within H281DRAFT_01268 at 102.838 kb on + strand at 102.839 kb on - strand at 102.855 kb on - strand at 102.948 kb on + strand at 102.948 kb on + strand at 102.948 kb on + strand at 102.949 kb on - strand at 103.723 kb on - strand, within H281DRAFT_01269 at 103.746 kb on + strand, within H281DRAFT_01269 at 103.746 kb on + strand, within H281DRAFT_01269 at 103.746 kb on + strand, within H281DRAFT_01269 at 103.747 kb on - strand, within H281DRAFT_01269
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 101,072 + H281DRAFT_01266 0.84 +1.0 101,072 + H281DRAFT_01266 0.84 +0.7 101,073 - H281DRAFT_01266 0.84 +0.1 101,075 + H281DRAFT_01266 0.84 -1.4 101,075 + H281DRAFT_01266 0.84 +0.1 101,075 + H281DRAFT_01266 0.84 +1.2 101,075 + H281DRAFT_01266 0.84 -0.6 101,109 + H281DRAFT_01266 0.87 -0.0 101,110 - H281DRAFT_01266 0.87 +0.2 101,264 + +0.8 101,381 - H281DRAFT_01267 0.10 -0.7 101,544 + H281DRAFT_01267 0.56 +0.1 101,544 + H281DRAFT_01267 0.56 -1.4 101,831 + -0.3 102,118 + H281DRAFT_01268 0.26 -0.1 102,121 - H281DRAFT_01268 0.26 +0.1 102,550 - H281DRAFT_01268 0.75 +0.2 102,603 + H281DRAFT_01268 0.81 -1.1 102,603 + H281DRAFT_01268 0.81 -0.4 102,838 + -0.5 102,839 - +0.0 102,855 - +0.1 102,948 + +1.5 102,948 + +0.2 102,948 + +0.7 102,949 - -0.2 103,723 - H281DRAFT_01269 0.84 +0.6 103,746 + H281DRAFT_01269 0.86 -0.8 103,746 + H281DRAFT_01269 0.86 -0.1 103,746 + H281DRAFT_01269 0.86 +1.6 103,747 - H281DRAFT_01269 0.86 +0.3
Or see this region's nucleotide sequence