Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01151

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01150 and H281DRAFT_01151 are separated by 116 nucleotidesH281DRAFT_01151 and H281DRAFT_01152 overlap by 4 nucleotides H281DRAFT_01150: H281DRAFT_01150 - putative membrane protein, at 1,299,254 to 1,300,351 _01150 H281DRAFT_01151: H281DRAFT_01151 - ceramide glucosyltransferase, at 1,300,468 to 1,301,634 _01151 H281DRAFT_01152: H281DRAFT_01152 - hopanoid biosynthesis associated radical SAM protein HpnJ, at 1,301,631 to 1,303,052 _01152 Position (kb) 1300 1301 1302Strain fitness (log2 ratio) -1 0 1at 1301.184 kb on - strand, within H281DRAFT_01151at 1301.412 kb on - strand, within H281DRAFT_01151at 1301.485 kb on + strand, within H281DRAFT_01151at 1301.598 kb on - strandat 1301.765 kb on - strandat 1301.765 kb on - strandat 1301.972 kb on - strand, within H281DRAFT_01152

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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1,301,184 - H281DRAFT_01151 0.61 +0.1
1,301,412 - H281DRAFT_01151 0.81 +0.6
1,301,485 + H281DRAFT_01151 0.87 +0.7
1,301,598 - +0.4
1,301,765 - +0.5
1,301,765 - +0.4
1,301,972 - H281DRAFT_01152 0.24 +0.8

Or see this region's nucleotide sequence