Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01147 and H281DRAFT_01148 are separated by 307 nucleotides H281DRAFT_01148 and H281DRAFT_01149 are separated by 0 nucleotides H281DRAFT_01149 and H281DRAFT_01150 overlap by 4 nucleotides
H281DRAFT_01147: H281DRAFT_01147 - hypothetical protein, at 1,296,329 to 1,296,781
_01147
H281DRAFT_01148: H281DRAFT_01148 - DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain, at 1,297,089 to 1,297,748
_01148
H281DRAFT_01149: H281DRAFT_01149 - two-component system, OmpR family, sensor histidine kinase QseC, at 1,297,749 to 1,299,257
_01149
H281DRAFT_01150: H281DRAFT_01150 - putative membrane protein, at 1,299,254 to 1,300,351
_01150
Position (kb) 1297
1298
1299
1300 Strain fitness (log2 ratio) -1
0
1 at 1296.910 kb on + strand at 1296.911 kb on - strand at 1297.221 kb on + strand, within H281DRAFT_01148 at 1297.222 kb on - strand, within H281DRAFT_01148 at 1297.623 kb on + strand, within H281DRAFT_01148 at 1297.728 kb on + strand at 1298.158 kb on - strand, within H281DRAFT_01149 at 1299.219 kb on - strand at 1299.219 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,296,910 + +0.3 1,296,911 - +0.1 1,297,221 + H281DRAFT_01148 0.20 +0.4 1,297,222 - H281DRAFT_01148 0.20 -0.2 1,297,623 + H281DRAFT_01148 0.81 +0.6 1,297,728 + -0.6 1,298,158 - H281DRAFT_01149 0.27 -0.9 1,299,219 - -0.3 1,299,219 - +0.0
Or see this region's nucleotide sequence