Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01019

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01018 and H281DRAFT_01019 are separated by 36 nucleotidesH281DRAFT_01019 and H281DRAFT_01020 are separated by 327 nucleotides H281DRAFT_01018: H281DRAFT_01018 - transcriptional regulator, AraC family, at 1,142,613 to 1,143,569 _01018 H281DRAFT_01019: H281DRAFT_01019 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 1,143,606 to 1,144,316 _01019 H281DRAFT_01020: H281DRAFT_01020 - FMN-dependent NADH-azoreductase, at 1,144,644 to 1,145,276 _01020 Position (kb) 1143 1144 1145Strain fitness (log2 ratio) -1 0 1at 1142.661 kb on + strandat 1143.297 kb on - strand, within H281DRAFT_01018at 1143.570 kb on - strandat 1143.889 kb on + strand, within H281DRAFT_01019at 1143.890 kb on - strand, within H281DRAFT_01019

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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1,142,661 + -0.4
1,143,297 - H281DRAFT_01018 0.71 -0.4
1,143,570 - +0.7
1,143,889 + H281DRAFT_01019 0.40 +1.1
1,143,890 - H281DRAFT_01019 0.40 +0.1

Or see this region's nucleotide sequence