Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00925 and H281DRAFT_00926 are separated by 121 nucleotides H281DRAFT_00926 and H281DRAFT_00927 are separated by 77 nucleotides
H281DRAFT_00925: H281DRAFT_00925 - Uncharacterized conserved protein, contains NRDE domain, at 1,028,870 to 1,029,751
_00925
H281DRAFT_00926: H281DRAFT_00926 - hypothetical protein, at 1,029,873 to 1,031,009
_00926
H281DRAFT_00927: H281DRAFT_00927 - UPF0755 protein, at 1,031,087 to 1,032,097
_00927
Position (kb) 1029
1030
1031
1032 Strain fitness (log2 ratio) -1
0
1
2 at 1028.999 kb on + strand, within H281DRAFT_00925 at 1029.000 kb on - strand, within H281DRAFT_00925 at 1029.031 kb on - strand, within H281DRAFT_00925 at 1029.266 kb on - strand, within H281DRAFT_00925 at 1029.287 kb on - strand, within H281DRAFT_00925 at 1029.354 kb on + strand, within H281DRAFT_00925 at 1029.354 kb on + strand, within H281DRAFT_00925 at 1029.354 kb on + strand, within H281DRAFT_00925 at 1029.355 kb on - strand, within H281DRAFT_00925 at 1029.355 kb on - strand, within H281DRAFT_00925 at 1029.355 kb on - strand, within H281DRAFT_00925 at 1029.387 kb on + strand, within H281DRAFT_00925 at 1029.388 kb on - strand, within H281DRAFT_00925 at 1029.388 kb on - strand, within H281DRAFT_00925 at 1029.388 kb on - strand, within H281DRAFT_00925 at 1029.541 kb on - strand, within H281DRAFT_00925 at 1029.541 kb on - strand, within H281DRAFT_00925 at 1029.743 kb on + strand at 1029.743 kb on + strand at 1029.743 kb on + strand at 1029.744 kb on - strand at 1029.744 kb on - strand at 1029.744 kb on - strand at 1031.056 kb on - strand at 1031.056 kb on - strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.060 kb on + strand at 1031.414 kb on + strand, within H281DRAFT_00927 at 1031.588 kb on + strand, within H281DRAFT_00927 at 1031.624 kb on + strand, within H281DRAFT_00927 at 1031.624 kb on + strand, within H281DRAFT_00927 at 1031.696 kb on + strand, within H281DRAFT_00927 at 1031.708 kb on + strand, within H281DRAFT_00927 at 1031.709 kb on - strand, within H281DRAFT_00927 at 1031.840 kb on + strand, within H281DRAFT_00927 at 1031.908 kb on + strand, within H281DRAFT_00927 at 1031.912 kb on + strand, within H281DRAFT_00927 at 1031.914 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927 at 1031.941 kb on + strand, within H281DRAFT_00927
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,028,999 + H281DRAFT_00925 0.15 +0.1 1,029,000 - H281DRAFT_00925 0.15 +1.1 1,029,031 - H281DRAFT_00925 0.18 -0.1 1,029,266 - H281DRAFT_00925 0.45 -0.1 1,029,287 - H281DRAFT_00925 0.47 -0.1 1,029,354 + H281DRAFT_00925 0.55 +0.6 1,029,354 + H281DRAFT_00925 0.55 +0.6 1,029,354 + H281DRAFT_00925 0.55 +0.6 1,029,355 - H281DRAFT_00925 0.55 +0.4 1,029,355 - H281DRAFT_00925 0.55 +0.2 1,029,355 - H281DRAFT_00925 0.55 +0.1 1,029,387 + H281DRAFT_00925 0.59 -0.2 1,029,388 - H281DRAFT_00925 0.59 +0.4 1,029,388 - H281DRAFT_00925 0.59 +0.4 1,029,388 - H281DRAFT_00925 0.59 -0.5 1,029,541 - H281DRAFT_00925 0.76 +0.2 1,029,541 - H281DRAFT_00925 0.76 +0.0 1,029,743 + -0.2 1,029,743 + +0.1 1,029,743 + +0.0 1,029,744 - +0.1 1,029,744 - +0.8 1,029,744 - +0.2 1,031,056 - +0.6 1,031,056 - -1.0 1,031,060 + +0.3 1,031,060 + -0.7 1,031,060 + -0.0 1,031,060 + -0.2 1,031,414 + H281DRAFT_00927 0.32 +1.2 1,031,588 + H281DRAFT_00927 0.50 +0.3 1,031,624 + H281DRAFT_00927 0.53 +1.2 1,031,624 + H281DRAFT_00927 0.53 +0.2 1,031,696 + H281DRAFT_00927 0.60 +1.3 1,031,708 + H281DRAFT_00927 0.61 -0.1 1,031,709 - H281DRAFT_00927 0.62 -1.2 1,031,840 + H281DRAFT_00927 0.74 -0.0 1,031,908 + H281DRAFT_00927 0.81 +1.0 1,031,912 + H281DRAFT_00927 0.82 +1.8 1,031,914 + H281DRAFT_00927 0.82 +1.2 1,031,941 + H281DRAFT_00927 0.84 +1.6 1,031,941 + H281DRAFT_00927 0.84 +1.0 1,031,941 + H281DRAFT_00927 0.84 +1.1
Or see this region's nucleotide sequence