Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00888 and H281DRAFT_00889 are separated by 217 nucleotides H281DRAFT_00889 and H281DRAFT_00890 are separated by 78 nucleotides H281DRAFT_00890 and H281DRAFT_00891 are separated by 300 nucleotides
H281DRAFT_00888: H281DRAFT_00888 - phytoene synthase, at 984,920 to 985,756
_00888
H281DRAFT_00889: H281DRAFT_00889 - tRNA_Leu_TAG, at 985,974 to 986,060
_00889
H281DRAFT_00890: H281DRAFT_00890 - hypothetical protein, at 986,139 to 986,426
_00890
H281DRAFT_00891: H281DRAFT_00891 - hypothetical protein, at 986,727 to 986,987
_00891
Position (kb) 985
986
987 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 985.222 kb on - strand, within H281DRAFT_00888 at 985.222 kb on - strand, within H281DRAFT_00888 at 985.222 kb on - strand, within H281DRAFT_00888 at 985.392 kb on + strand, within H281DRAFT_00888 at 985.392 kb on + strand, within H281DRAFT_00888 at 985.393 kb on - strand, within H281DRAFT_00888 at 985.740 kb on + strand at 985.835 kb on + strand at 986.069 kb on + strand at 986.493 kb on + strand at 986.494 kb on - strand at 986.495 kb on + strand at 986.537 kb on - strand at 986.565 kb on + strand at 986.595 kb on + strand at 986.599 kb on + strand at 986.599 kb on + strand at 986.599 kb on + strand at 986.599 kb on + strand at 986.610 kb on - strand at 986.610 kb on - strand at 986.708 kb on + strand at 986.714 kb on + strand at 986.774 kb on - strand, within H281DRAFT_00891 at 986.798 kb on + strand, within H281DRAFT_00891 at 986.798 kb on + strand, within H281DRAFT_00891 at 986.965 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 985,222 - H281DRAFT_00888 0.36 +1.6 985,222 - H281DRAFT_00888 0.36 +3.8 985,222 - H281DRAFT_00888 0.36 +1.2 985,392 + H281DRAFT_00888 0.56 +0.0 985,392 + H281DRAFT_00888 0.56 +1.3 985,393 - H281DRAFT_00888 0.57 +0.7 985,740 + -0.2 985,835 + -0.3 986,069 + -3.0 986,493 + -0.3 986,494 - -1.0 986,495 + -0.5 986,537 - +0.6 986,565 + -0.1 986,595 + -1.5 986,599 + -0.3 986,599 + -0.2 986,599 + -0.2 986,599 + +1.3 986,610 - +0.3 986,610 - -0.2 986,708 + -0.3 986,714 + -0.2 986,774 - H281DRAFT_00891 0.18 +0.4 986,798 + H281DRAFT_00891 0.27 +0.1 986,798 + H281DRAFT_00891 0.27 -0.6 986,965 + -0.0
Or see this region's nucleotide sequence