Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00882 and H281DRAFT_00883 are separated by 112 nucleotides H281DRAFT_00883 and H281DRAFT_00884 are separated by 74 nucleotides H281DRAFT_00884 and H281DRAFT_00885 are separated by 220 nucleotides
H281DRAFT_00882: H281DRAFT_00882 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 978,590 to 979,069
_00882
H281DRAFT_00883: H281DRAFT_00883 - alkyl hydroperoxide reductase subunit D, at 979,182 to 979,700
_00883
H281DRAFT_00884: H281DRAFT_00884 - peroxiredoxin (alkyl hydroperoxide reductase subunit C), at 979,775 to 980,323
_00884
H281DRAFT_00885: H281DRAFT_00885 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 980,544 to 981,893
_00885
Position (kb) 979
980
981 Strain fitness (log2 ratio) -1
0
1
2 at 979.178 kb on + strand at 979.184 kb on - strand at 979.184 kb on - strand at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.340 kb on - strand, within H281DRAFT_00883 at 979.340 kb on - strand at 979.381 kb on + strand, within H281DRAFT_00883 at 979.396 kb on - strand, within H281DRAFT_00883 at 979.444 kb on + strand, within H281DRAFT_00883 at 979.444 kb on + strand, within H281DRAFT_00883 at 979.445 kb on - strand, within H281DRAFT_00883 at 979.548 kb on + strand, within H281DRAFT_00883 at 979.549 kb on - strand, within H281DRAFT_00883 at 979.776 kb on + strand at 979.776 kb on + strand at 979.777 kb on - strand at 980.010 kb on + strand, within H281DRAFT_00884 at 980.011 kb on - strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.036 kb on - strand, within H281DRAFT_00884 at 980.088 kb on - strand, within H281DRAFT_00884 at 980.088 kb on - strand, within H281DRAFT_00884 at 980.179 kb on - strand, within H281DRAFT_00884 at 980.184 kb on + strand, within H281DRAFT_00884 at 980.184 kb on + strand, within H281DRAFT_00884 at 980.184 kb on + strand, within H281DRAFT_00884 at 980.185 kb on - strand, within H281DRAFT_00884 at 980.185 kb on - strand, within H281DRAFT_00884 at 980.185 kb on - strand, within H281DRAFT_00884 at 980.185 kb on - strand, within H281DRAFT_00884 at 980.408 kb on - strand at 980.459 kb on + strand at 980.459 kb on + strand at 980.459 kb on + strand at 980.459 kb on + strand at 980.459 kb on + strand at 980.459 kb on + strand at 980.460 kb on - strand at 980.460 kb on - strand at 980.708 kb on - strand, within H281DRAFT_00885
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 979,178 + +0.6 979,184 - +0.2 979,184 - +0.2 979,339 + H281DRAFT_00883 0.30 -0.7 979,339 + H281DRAFT_00883 0.30 -0.4 979,339 + H281DRAFT_00883 0.30 -0.1 979,339 + H281DRAFT_00883 0.30 -0.4 979,339 + H281DRAFT_00883 0.30 +0.5 979,340 - H281DRAFT_00883 0.30 +0.4 979,340 - +2.6 979,381 + H281DRAFT_00883 0.38 -0.5 979,396 - H281DRAFT_00883 0.41 +0.6 979,444 + H281DRAFT_00883 0.50 +0.9 979,444 + H281DRAFT_00883 0.50 +0.0 979,445 - H281DRAFT_00883 0.51 +0.0 979,548 + H281DRAFT_00883 0.71 +0.8 979,549 - H281DRAFT_00883 0.71 +0.0 979,776 + -0.3 979,776 + +1.4 979,777 - -0.5 980,010 + H281DRAFT_00884 0.43 +0.7 980,011 - H281DRAFT_00884 0.43 -0.6 980,035 + H281DRAFT_00884 0.47 +0.6 980,035 + H281DRAFT_00884 0.47 +0.2 980,035 + H281DRAFT_00884 0.47 +0.2 980,036 - H281DRAFT_00884 0.48 -0.2 980,088 - H281DRAFT_00884 0.57 -0.2 980,088 - H281DRAFT_00884 0.57 +0.9 980,179 - H281DRAFT_00884 0.74 -0.9 980,184 + H281DRAFT_00884 0.74 -0.0 980,184 + H281DRAFT_00884 0.74 +1.9 980,184 + H281DRAFT_00884 0.74 -0.8 980,185 - H281DRAFT_00884 0.75 -0.7 980,185 - H281DRAFT_00884 0.75 +0.1 980,185 - H281DRAFT_00884 0.75 +0.1 980,185 - H281DRAFT_00884 0.75 +1.3 980,408 - +0.5 980,459 + -0.2 980,459 + +0.1 980,459 + -0.2 980,459 + -0.4 980,459 + +0.3 980,459 + +0.2 980,460 - +0.8 980,460 - -0.3 980,708 - H281DRAFT_00885 0.12 +1.3
Or see this region's nucleotide sequence