Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00880 and H281DRAFT_00881 are separated by 183 nucleotides H281DRAFT_00881 and H281DRAFT_00882 are separated by 45 nucleotides H281DRAFT_00882 and H281DRAFT_00883 are separated by 112 nucleotides H281DRAFT_00883 and H281DRAFT_00884 are separated by 74 nucleotides
H281DRAFT_00880: H281DRAFT_00880 - transcription-repair coupling factor, at 974,228 to 977,710
_00880
H281DRAFT_00881: H281DRAFT_00881 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 977,894 to 978,544
_00881
H281DRAFT_00882: H281DRAFT_00882 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 978,590 to 979,069
_00882
H281DRAFT_00883: H281DRAFT_00883 - alkyl hydroperoxide reductase subunit D, at 979,182 to 979,700
_00883
H281DRAFT_00884: H281DRAFT_00884 - peroxiredoxin (alkyl hydroperoxide reductase subunit C), at 979,775 to 980,323
_00884
Position (kb) 978
979
980 Strain fitness (log2 ratio) -1
0
1
2 at 977.683 kb on - strand at 977.710 kb on + strand at 977.710 kb on + strand at 977.711 kb on - strand at 977.711 kb on - strand at 977.785 kb on + strand at 977.785 kb on + strand at 977.786 kb on - strand at 977.788 kb on + strand at 977.790 kb on + strand at 977.804 kb on + strand at 979.178 kb on + strand at 979.184 kb on - strand at 979.184 kb on - strand at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.339 kb on + strand, within H281DRAFT_00883 at 979.340 kb on - strand, within H281DRAFT_00883 at 979.340 kb on - strand at 979.381 kb on + strand, within H281DRAFT_00883 at 979.396 kb on - strand, within H281DRAFT_00883 at 979.444 kb on + strand, within H281DRAFT_00883 at 979.444 kb on + strand, within H281DRAFT_00883 at 979.445 kb on - strand, within H281DRAFT_00883 at 979.548 kb on + strand, within H281DRAFT_00883 at 979.549 kb on - strand, within H281DRAFT_00883 at 979.776 kb on + strand at 979.776 kb on + strand at 979.777 kb on - strand at 980.010 kb on + strand, within H281DRAFT_00884 at 980.011 kb on - strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.035 kb on + strand, within H281DRAFT_00884 at 980.036 kb on - strand, within H281DRAFT_00884
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 977,683 - +0.9 977,710 + +0.3 977,710 + +0.6 977,711 - +0.6 977,711 - +0.1 977,785 + -0.9 977,785 + +0.5 977,786 - +0.4 977,788 + -0.3 977,790 + -0.2 977,804 + -0.7 979,178 + +0.6 979,184 - +0.2 979,184 - +0.2 979,339 + H281DRAFT_00883 0.30 -0.7 979,339 + H281DRAFT_00883 0.30 -0.4 979,339 + H281DRAFT_00883 0.30 -0.1 979,339 + H281DRAFT_00883 0.30 -0.4 979,339 + H281DRAFT_00883 0.30 +0.5 979,340 - H281DRAFT_00883 0.30 +0.4 979,340 - +2.6 979,381 + H281DRAFT_00883 0.38 -0.5 979,396 - H281DRAFT_00883 0.41 +0.6 979,444 + H281DRAFT_00883 0.50 +0.9 979,444 + H281DRAFT_00883 0.50 +0.0 979,445 - H281DRAFT_00883 0.51 +0.0 979,548 + H281DRAFT_00883 0.71 +0.8 979,549 - H281DRAFT_00883 0.71 +0.0 979,776 + -0.3 979,776 + +1.4 979,777 - -0.5 980,010 + H281DRAFT_00884 0.43 +0.7 980,011 - H281DRAFT_00884 0.43 -0.6 980,035 + H281DRAFT_00884 0.47 +0.6 980,035 + H281DRAFT_00884 0.47 +0.2 980,035 + H281DRAFT_00884 0.47 +0.2 980,036 - H281DRAFT_00884 0.48 -0.2
Or see this region's nucleotide sequence