Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00838 and H281DRAFT_00839 are separated by 128 nucleotides H281DRAFT_00839 and H281DRAFT_00840 are separated by 209 nucleotides H281DRAFT_00840 and H281DRAFT_00841 overlap by 86 nucleotides
H281DRAFT_00838: H281DRAFT_00838 - NitT/TauT family transport system permease protein, at 928,074 to 928,898
_00838
H281DRAFT_00839: H281DRAFT_00839 - NADPH2:quinone reductase, at 929,027 to 930,001
_00839
H281DRAFT_00840: H281DRAFT_00840 - 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase, at 930,211 to 930,969
_00840
H281DRAFT_00841: H281DRAFT_00841 - hypothetical protein, at 930,884 to 931,456
_00841
Position (kb) 929
930
931 Strain fitness (log2 ratio) -2
-1
0
1 at 928.042 kb on - strand at 928.047 kb on + strand at 928.047 kb on + strand at 928.048 kb on - strand at 928.058 kb on + strand at 928.059 kb on - strand at 928.155 kb on + strand at 928.284 kb on + strand, within H281DRAFT_00838 at 928.407 kb on + strand, within H281DRAFT_00838 at 928.408 kb on - strand, within H281DRAFT_00838 at 928.408 kb on - strand, within H281DRAFT_00838 at 928.408 kb on - strand, within H281DRAFT_00838 at 928.408 kb on - strand, within H281DRAFT_00838 at 928.539 kb on + strand, within H281DRAFT_00838 at 928.539 kb on + strand, within H281DRAFT_00838 at 928.667 kb on + strand, within H281DRAFT_00838 at 928.668 kb on - strand, within H281DRAFT_00838 at 928.711 kb on - strand, within H281DRAFT_00838 at 928.897 kb on - strand at 929.035 kb on + strand at 929.036 kb on - strand at 929.036 kb on - strand at 929.072 kb on - strand at 929.121 kb on + strand at 929.122 kb on - strand at 929.122 kb on - strand at 929.301 kb on + strand, within H281DRAFT_00839 at 929.341 kb on + strand, within H281DRAFT_00839 at 929.343 kb on + strand, within H281DRAFT_00839 at 929.343 kb on + strand, within H281DRAFT_00839 at 929.344 kb on - strand, within H281DRAFT_00839 at 929.365 kb on - strand, within H281DRAFT_00839 at 929.431 kb on - strand, within H281DRAFT_00839 at 929.564 kb on + strand, within H281DRAFT_00839 at 929.850 kb on + strand, within H281DRAFT_00839 at 929.850 kb on + strand, within H281DRAFT_00839 at 929.850 kb on + strand, within H281DRAFT_00839 at 929.850 kb on + strand, within H281DRAFT_00839 at 929.850 kb on + strand, within H281DRAFT_00839 at 929.952 kb on - strand at 929.952 kb on - strand at 929.977 kb on - strand at 930.043 kb on - strand at 930.061 kb on + strand at 930.062 kb on - strand at 930.067 kb on + strand at 930.068 kb on - strand at 930.068 kb on - strand at 930.200 kb on - strand at 930.221 kb on + strand at 930.222 kb on - strand at 930.242 kb on - strand at 930.242 kb on - strand at 930.269 kb on - strand at 930.392 kb on - strand, within H281DRAFT_00840 at 930.392 kb on - strand, within H281DRAFT_00840 at 930.394 kb on + strand, within H281DRAFT_00840 at 930.395 kb on - strand, within H281DRAFT_00840 at 930.514 kb on + strand, within H281DRAFT_00840 at 930.514 kb on + strand, within H281DRAFT_00840 at 930.514 kb on - strand, within H281DRAFT_00840 at 930.515 kb on - strand at 930.646 kb on + strand, within H281DRAFT_00840 at 930.729 kb on + strand, within H281DRAFT_00840 at 930.730 kb on - strand, within H281DRAFT_00840 at 930.780 kb on + strand, within H281DRAFT_00840 at 930.803 kb on - strand, within H281DRAFT_00840 at 930.803 kb on - strand, within H281DRAFT_00840 at 930.838 kb on - strand, within H281DRAFT_00840
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 928,042 - +1.6 928,047 + -0.0 928,047 + +0.5 928,048 - -0.0 928,058 + -0.2 928,059 - +0.3 928,155 + -0.7 928,284 + H281DRAFT_00838 0.25 +0.3 928,407 + H281DRAFT_00838 0.40 -0.1 928,408 - H281DRAFT_00838 0.40 -0.8 928,408 - H281DRAFT_00838 0.40 +0.6 928,408 - H281DRAFT_00838 0.40 -1.2 928,408 - H281DRAFT_00838 0.40 +0.7 928,539 + H281DRAFT_00838 0.56 -0.6 928,539 + H281DRAFT_00838 0.56 -0.2 928,667 + H281DRAFT_00838 0.72 +0.6 928,668 - H281DRAFT_00838 0.72 -0.5 928,711 - H281DRAFT_00838 0.77 -0.6 928,897 - -0.2 929,035 + +0.3 929,036 - -1.2 929,036 - +0.3 929,072 - +0.5 929,121 + -2.4 929,122 - +0.5 929,122 - -0.1 929,301 + H281DRAFT_00839 0.28 +1.3 929,341 + H281DRAFT_00839 0.32 +1.5 929,343 + H281DRAFT_00839 0.32 +0.2 929,343 + H281DRAFT_00839 0.32 -0.4 929,344 - H281DRAFT_00839 0.33 +0.3 929,365 - H281DRAFT_00839 0.35 +0.3 929,431 - H281DRAFT_00839 0.41 +0.8 929,564 + H281DRAFT_00839 0.55 +0.5 929,850 + H281DRAFT_00839 0.84 -0.4 929,850 + H281DRAFT_00839 0.84 -1.1 929,850 + H281DRAFT_00839 0.84 -0.1 929,850 + H281DRAFT_00839 0.84 +0.4 929,850 + H281DRAFT_00839 0.84 -1.1 929,952 - +0.7 929,952 - +0.3 929,977 - -0.2 930,043 - +0.8 930,061 + +0.2 930,062 - -0.4 930,067 + -0.0 930,068 - -0.7 930,068 - +0.3 930,200 - -0.0 930,221 + +0.4 930,222 - -1.6 930,242 - -1.7 930,242 - -1.8 930,269 - -1.7 930,392 - H281DRAFT_00840 0.24 -2.0 930,392 - H281DRAFT_00840 0.24 +1.0 930,394 + H281DRAFT_00840 0.24 -0.1 930,395 - H281DRAFT_00840 0.24 -2.3 930,514 + H281DRAFT_00840 0.40 +0.8 930,514 + H281DRAFT_00840 0.40 -0.7 930,514 - H281DRAFT_00840 0.40 -1.2 930,515 - +0.6 930,646 + H281DRAFT_00840 0.57 -0.6 930,729 + H281DRAFT_00840 0.68 -1.1 930,730 - H281DRAFT_00840 0.68 -2.0 930,780 + H281DRAFT_00840 0.75 +0.6 930,803 - H281DRAFT_00840 0.78 -0.0 930,803 - H281DRAFT_00840 0.78 -2.2 930,838 - H281DRAFT_00840 0.83 -0.5
Or see this region's nucleotide sequence