Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00812

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00811 and H281DRAFT_00812 are separated by 254 nucleotidesH281DRAFT_00812 and H281DRAFT_00813 are separated by 24 nucleotidesH281DRAFT_00813 and H281DRAFT_00814 are separated by 17 nucleotidesH281DRAFT_00814 and H281DRAFT_00815 are separated by 60 nucleotides H281DRAFT_00811: H281DRAFT_00811 - L-threonine synthase, at 900,086 to 901,537 _00811 H281DRAFT_00812: H281DRAFT_00812 - molybdopterin molybdotransferase, at 901,792 to 903,057 _00812 H281DRAFT_00813: H281DRAFT_00813 - molybdopterin synthase subunit MoaD (EC 2.8.1.12), at 903,082 to 903,339 _00813 H281DRAFT_00814: H281DRAFT_00814 - molybdopterin synthase subunit MoaE, at 903,357 to 903,833 _00814 H281DRAFT_00815: H281DRAFT_00815 - hemoglobin, at 903,894 to 904,436 _00815 Position (kb) 901 902 903 904Strain fitness (log2 ratio) -3 -2 -1 0 1at 902.380 kb on + strand, within H281DRAFT_00812at 902.381 kb on - strand, within H281DRAFT_00812at 902.398 kb on - strand, within H281DRAFT_00812at 903.699 kb on + strand, within H281DRAFT_00814at 904.036 kb on + strand, within H281DRAFT_00815at 904.036 kb on + strand, within H281DRAFT_00815at 904.037 kb on - strand, within H281DRAFT_00815

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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902,380 + H281DRAFT_00812 0.46 +0.0
902,381 - H281DRAFT_00812 0.47 -3.1
902,398 - H281DRAFT_00812 0.48 -2.9
903,699 + H281DRAFT_00814 0.72 -1.9
904,036 + H281DRAFT_00815 0.26 -0.2
904,036 + H281DRAFT_00815 0.26 +0.9
904,037 - H281DRAFT_00815 0.26 -0.0

Or see this region's nucleotide sequence