Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00794

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00793 and H281DRAFT_00794 are separated by 148 nucleotidesH281DRAFT_00794 and H281DRAFT_00795 overlap by 1 nucleotides H281DRAFT_00793: H281DRAFT_00793 - primary replicative DNA helicase, at 878,629 to 880,014 _00793 H281DRAFT_00794: H281DRAFT_00794 - hypothetical protein, at 880,163 to 880,789 _00794 H281DRAFT_00795: H281DRAFT_00795 - inorganic phosphate transporter, PiT family, at 880,789 to 881,799 _00795 Position (kb) 880 881Strain fitness (log2 ratio) -1 0 1 2at 880.070 kb on + strandat 880.092 kb on - strandat 880.115 kb on + strandat 880.116 kb on - strandat 880.116 kb on - strandat 880.138 kb on + strandat 880.139 kb on - strandat 880.139 kb on - strandat 880.399 kb on + strand, within H281DRAFT_00794at 880.399 kb on + strand, within H281DRAFT_00794at 880.400 kb on - strand, within H281DRAFT_00794at 880.749 kb on + strandat 880.750 kb on - strandat 880.788 kb on - strandat 880.800 kb on - strandat 880.800 kb on - strandat 881.016 kb on - strand, within H281DRAFT_00795at 881.103 kb on - strand, within H281DRAFT_00795at 881.278 kb on + strand, within H281DRAFT_00795at 881.347 kb on + strand, within H281DRAFT_00795at 881.347 kb on + strand, within H281DRAFT_00795at 881.394 kb on + strand, within H281DRAFT_00795at 881.474 kb on - strand, within H281DRAFT_00795

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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880,070 + +0.7
880,092 - +0.9
880,115 + +0.1
880,116 - -1.1
880,116 - +1.4
880,138 + +0.6
880,139 - -0.0
880,139 - -0.2
880,399 + H281DRAFT_00794 0.38 +1.6
880,399 + H281DRAFT_00794 0.38 +0.5
880,400 - H281DRAFT_00794 0.38 +0.6
880,749 + +0.6
880,750 - -1.0
880,788 - +2.0
880,800 - -1.6
880,800 - -0.0
881,016 - H281DRAFT_00795 0.22 -0.7
881,103 - H281DRAFT_00795 0.31 -0.6
881,278 + H281DRAFT_00795 0.48 -0.8
881,347 + H281DRAFT_00795 0.55 -0.2
881,347 + H281DRAFT_00795 0.55 -0.2
881,394 + H281DRAFT_00795 0.60 -0.6
881,474 - H281DRAFT_00795 0.68 +0.9

Or see this region's nucleotide sequence