Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00733

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00732 and H281DRAFT_00733 overlap by 4 nucleotidesH281DRAFT_00733 and H281DRAFT_00734 are separated by 115 nucleotides H281DRAFT_00732: H281DRAFT_00732 - hypothetical protein, at 825,468 to 827,876 _00732 H281DRAFT_00733: H281DRAFT_00733 - Glycosyltransferase involved in cell wall bisynthesis, at 827,873 to 829,027 _00733 H281DRAFT_00734: H281DRAFT_00734 - Membrane protein involved in the export of O-antigen and teichoic acid, at 829,143 to 830,600 _00734 Position (kb) 827 828 829 830Strain fitness (log2 ratio) -1 0 1 2at 826.875 kb on + strand, within H281DRAFT_00732at 827.008 kb on - strand, within H281DRAFT_00732at 827.029 kb on - strand, within H281DRAFT_00732at 828.198 kb on + strand, within H281DRAFT_00733at 828.384 kb on + strand, within H281DRAFT_00733at 829.302 kb on + strand, within H281DRAFT_00734at 829.676 kb on + strand, within H281DRAFT_00734at 829.677 kb on - strandat 829.826 kb on - strand, within H281DRAFT_00734

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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826,875 + H281DRAFT_00732 0.58 -0.8
827,008 - H281DRAFT_00732 0.64 -0.3
827,029 - H281DRAFT_00732 0.65 -1.1
828,198 + H281DRAFT_00733 0.28 -0.5
828,384 + H281DRAFT_00733 0.44 -0.8
829,302 + H281DRAFT_00734 0.11 -0.2
829,676 + H281DRAFT_00734 0.37 -0.6
829,677 - +1.9
829,826 - H281DRAFT_00734 0.47 -0.3

Or see this region's nucleotide sequence