Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00706

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00705 and H281DRAFT_00706 are separated by 192 nucleotidesH281DRAFT_00706 and H281DRAFT_00707 are separated by 51 nucleotides H281DRAFT_00705: H281DRAFT_00705 - fatty-acyl-CoA synthase, at 790,641 to 792,560 _00705 H281DRAFT_00706: H281DRAFT_00706 - outer membrane protein, at 792,753 to 793,490 _00706 H281DRAFT_00707: H281DRAFT_00707 - trimethylamine-N-oxide reductase (cytochrome c), at 793,542 to 796,520 _00707 Position (kb) 792 793 794Strain fitness (log2 ratio) -1 0 1at 792.192 kb on + strand, within H281DRAFT_00705at 793.283 kb on + strand, within H281DRAFT_00706at 793.751 kb on - strandat 793.996 kb on + strand, within H281DRAFT_00707at 794.235 kb on + strand, within H281DRAFT_00707at 794.449 kb on - strand, within H281DRAFT_00707

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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792,192 + H281DRAFT_00705 0.81 +0.2
793,283 + H281DRAFT_00706 0.72 -0.9
793,751 - +0.3
793,996 + H281DRAFT_00707 0.15 +0.2
794,235 + H281DRAFT_00707 0.23 -0.1
794,449 - H281DRAFT_00707 0.30 +0.6

Or see this region's nucleotide sequence