Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00536 and H281DRAFT_00537 overlap by 14 nucleotides H281DRAFT_00537 and H281DRAFT_00538 are separated by 236 nucleotides
H281DRAFT_00536: H281DRAFT_00536 - hypothetical protein, at 602,415 to 603,830
_00536
H281DRAFT_00537: H281DRAFT_00537 - DNA mismatch repair protein MutS, at 603,817 to 606,501
_00537
H281DRAFT_00538: H281DRAFT_00538 - Major Facilitator Superfamily protein, at 606,738 to 608,099
_00538
Position (kb) 603
604
605
606
607 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 602.890 kb on - strand, within H281DRAFT_00536 at 602.963 kb on - strand, within H281DRAFT_00536 at 603.505 kb on + strand, within H281DRAFT_00536 at 603.506 kb on - strand, within H281DRAFT_00536 at 603.506 kb on - strand, within H281DRAFT_00536 at 603.662 kb on - strand, within H281DRAFT_00536 at 603.703 kb on - strand at 603.703 kb on - strand at 603.860 kb on + strand at 603.861 kb on - strand at 603.861 kb on - strand at 603.861 kb on - strand at 604.263 kb on - strand, within H281DRAFT_00537 at 604.263 kb on - strand, within H281DRAFT_00537 at 604.281 kb on + strand, within H281DRAFT_00537 at 604.532 kb on + strand, within H281DRAFT_00537 at 604.532 kb on + strand, within H281DRAFT_00537 at 604.533 kb on - strand, within H281DRAFT_00537 at 604.533 kb on - strand, within H281DRAFT_00537 at 604.590 kb on + strand, within H281DRAFT_00537 at 604.638 kb on + strand, within H281DRAFT_00537 at 604.639 kb on - strand, within H281DRAFT_00537 at 604.960 kb on + strand, within H281DRAFT_00537 at 605.025 kb on - strand, within H281DRAFT_00537 at 605.025 kb on - strand, within H281DRAFT_00537 at 605.046 kb on - strand, within H281DRAFT_00537 at 605.046 kb on - strand, within H281DRAFT_00537 at 605.418 kb on + strand, within H281DRAFT_00537 at 605.419 kb on - strand, within H281DRAFT_00537 at 605.629 kb on - strand, within H281DRAFT_00537 at 605.667 kb on + strand, within H281DRAFT_00537 at 605.668 kb on - strand, within H281DRAFT_00537 at 605.670 kb on - strand, within H281DRAFT_00537 at 605.738 kb on + strand, within H281DRAFT_00537 at 605.739 kb on - strand, within H281DRAFT_00537 at 606.160 kb on + strand, within H281DRAFT_00537 at 606.160 kb on + strand, within H281DRAFT_00537 at 606.183 kb on + strand, within H281DRAFT_00537 at 606.183 kb on + strand, within H281DRAFT_00537 at 606.238 kb on + strand at 606.255 kb on - strand at 606.380 kb on + strand at 606.381 kb on - strand at 606.381 kb on - strand at 606.399 kb on - strand at 606.521 kb on + strand at 606.643 kb on + strand at 606.644 kb on - strand at 607.056 kb on - strand, within H281DRAFT_00538 at 607.056 kb on - strand, within H281DRAFT_00538 at 607.057 kb on + strand, within H281DRAFT_00538 at 607.058 kb on - strand, within H281DRAFT_00538 at 607.073 kb on - strand, within H281DRAFT_00538 at 607.073 kb on - strand, within H281DRAFT_00538 at 607.121 kb on - strand, within H281DRAFT_00538 at 607.356 kb on + strand, within H281DRAFT_00538 at 607.405 kb on + strand, within H281DRAFT_00538 at 607.405 kb on + strand, within H281DRAFT_00538 at 607.405 kb on + strand, within H281DRAFT_00538 at 607.405 kb on + strand, within H281DRAFT_00538 at 607.406 kb on - strand at 607.406 kb on - strand, within H281DRAFT_00538 at 607.406 kb on - strand, within H281DRAFT_00538
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 602,890 - H281DRAFT_00536 0.34 +0.4 602,963 - H281DRAFT_00536 0.39 +0.1 603,505 + H281DRAFT_00536 0.77 -0.1 603,506 - H281DRAFT_00536 0.77 -0.2 603,506 - H281DRAFT_00536 0.77 +0.3 603,662 - H281DRAFT_00536 0.88 -0.6 603,703 - -1.6 603,703 - -0.1 603,860 + -0.4 603,861 - -0.4 603,861 - -0.3 603,861 - +0.0 604,263 - H281DRAFT_00537 0.17 +0.0 604,263 - H281DRAFT_00537 0.17 +0.8 604,281 + H281DRAFT_00537 0.17 +0.3 604,532 + H281DRAFT_00537 0.27 +0.2 604,532 + H281DRAFT_00537 0.27 -0.6 604,533 - H281DRAFT_00537 0.27 +0.4 604,533 - H281DRAFT_00537 0.27 -0.1 604,590 + H281DRAFT_00537 0.29 +0.2 604,638 + H281DRAFT_00537 0.31 +0.5 604,639 - H281DRAFT_00537 0.31 -0.6 604,960 + H281DRAFT_00537 0.43 +0.3 605,025 - H281DRAFT_00537 0.45 +0.4 605,025 - H281DRAFT_00537 0.45 -0.4 605,046 - H281DRAFT_00537 0.46 +0.0 605,046 - H281DRAFT_00537 0.46 +0.7 605,418 + H281DRAFT_00537 0.60 -0.2 605,419 - H281DRAFT_00537 0.60 -0.0 605,629 - H281DRAFT_00537 0.67 +0.2 605,667 + H281DRAFT_00537 0.69 -0.3 605,668 - H281DRAFT_00537 0.69 -0.4 605,670 - H281DRAFT_00537 0.69 -0.4 605,738 + H281DRAFT_00537 0.72 +0.3 605,739 - H281DRAFT_00537 0.72 -0.5 606,160 + H281DRAFT_00537 0.87 -0.4 606,160 + H281DRAFT_00537 0.87 -0.7 606,183 + H281DRAFT_00537 0.88 +0.1 606,183 + H281DRAFT_00537 0.88 -2.3 606,238 + +0.2 606,255 - +0.1 606,380 + +0.2 606,381 - -0.3 606,381 - -0.1 606,399 - +0.0 606,521 + -0.8 606,643 + +0.9 606,644 - +0.3 607,056 - H281DRAFT_00538 0.23 +0.1 607,056 - H281DRAFT_00538 0.23 +1.3 607,057 + H281DRAFT_00538 0.23 +0.1 607,058 - H281DRAFT_00538 0.23 -0.1 607,073 - H281DRAFT_00538 0.25 +0.4 607,073 - H281DRAFT_00538 0.25 +0.0 607,121 - H281DRAFT_00538 0.28 +0.1 607,356 + H281DRAFT_00538 0.45 +0.5 607,405 + H281DRAFT_00538 0.49 +0.3 607,405 + H281DRAFT_00538 0.49 -1.3 607,405 + H281DRAFT_00538 0.49 -1.3 607,405 + H281DRAFT_00538 0.49 +1.1 607,406 - +3.3 607,406 - H281DRAFT_00538 0.49 +0.2 607,406 - H281DRAFT_00538 0.49 +0.7
Or see this region's nucleotide sequence