Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00233 and H281DRAFT_00234 are separated by 105 nucleotides H281DRAFT_00234 and H281DRAFT_00235 overlap by 4 nucleotides H281DRAFT_00235 and H281DRAFT_00236 are separated by 238 nucleotides
H281DRAFT_00233: H281DRAFT_00233 - NitT/TauT family transport system ATP-binding protein, at 253,364 to 254,710
_00233
H281DRAFT_00234: H281DRAFT_00234 - hypothetical protein, at 254,816 to 255,358
_00234
H281DRAFT_00235: H281DRAFT_00235 - hypothetical protein, at 255,355 to 255,969
_00235
H281DRAFT_00236: H281DRAFT_00236 - sigma54 specific transcriptional regulator, Fis family, at 256,208 to 257,266
_00236
Position (kb) 255
256 Strain fitness (log2 ratio) -1
0
1 at 254.902 kb on - strand, within H281DRAFT_00234 at 255.124 kb on + strand, within H281DRAFT_00234 at 255.126 kb on + strand, within H281DRAFT_00234 at 255.287 kb on + strand, within H281DRAFT_00234 at 255.288 kb on - strand, within H281DRAFT_00234 at 255.430 kb on - strand, within H281DRAFT_00235 at 255.677 kb on + strand, within H281DRAFT_00235 at 255.741 kb on + strand, within H281DRAFT_00235 at 255.990 kb on - strand at 255.990 kb on - strand at 256.080 kb on + strand at 256.220 kb on - strand at 256.264 kb on - strand at 256.677 kb on + strand, within H281DRAFT_00236 at 256.677 kb on + strand, within H281DRAFT_00236 at 256.678 kb on - strand, within H281DRAFT_00236
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 254,902 - H281DRAFT_00234 0.16 -1.0 255,124 + H281DRAFT_00234 0.57 -1.0 255,126 + H281DRAFT_00234 0.57 +0.0 255,287 + H281DRAFT_00234 0.87 -1.3 255,288 - H281DRAFT_00234 0.87 -0.5 255,430 - H281DRAFT_00235 0.12 +0.8 255,677 + H281DRAFT_00235 0.52 +0.8 255,741 + H281DRAFT_00235 0.63 -0.8 255,990 - -0.3 255,990 - +0.2 256,080 + +0.3 256,220 - +0.8 256,264 - +0.3 256,677 + H281DRAFT_00236 0.44 +0.4 256,677 + H281DRAFT_00236 0.44 +0.5 256,678 - H281DRAFT_00236 0.44 +1.3
Or see this region's nucleotide sequence