Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00221 and H281DRAFT_00222 are separated by 42 nucleotides H281DRAFT_00222 and H281DRAFT_00223 overlap by 4 nucleotides H281DRAFT_00223 and H281DRAFT_00224 are separated by 308 nucleotides
H281DRAFT_00221: H281DRAFT_00221 - amino acid ABC transporter ATP-binding protein, PAAT family, at 241,093 to 241,872
_00221
H281DRAFT_00222: H281DRAFT_00222 - amino acid ABC transporter membrane protein 2, PAAT family, at 241,915 to 242,628
_00222
H281DRAFT_00223: H281DRAFT_00223 - amino acid ABC transporter membrane protein 1, PAAT family, at 242,625 to 243,314
_00223
H281DRAFT_00224: H281DRAFT_00224 - amino acid ABC transporter substrate-binding protein, PAAT family, at 243,623 to 244,399
_00224
Position (kb) 242
243
244 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 241.893 kb on - strand at 242.000 kb on + strand, within H281DRAFT_00222 at 242.001 kb on - strand, within H281DRAFT_00222 at 242.040 kb on - strand, within H281DRAFT_00222 at 242.142 kb on - strand, within H281DRAFT_00222 at 242.144 kb on + strand, within H281DRAFT_00222 at 242.145 kb on - strand, within H281DRAFT_00222 at 242.190 kb on - strand, within H281DRAFT_00222 at 242.213 kb on + strand, within H281DRAFT_00222 at 242.280 kb on + strand, within H281DRAFT_00222 at 242.325 kb on + strand, within H281DRAFT_00222 at 242.326 kb on - strand, within H281DRAFT_00222 at 242.381 kb on + strand, within H281DRAFT_00222 at 242.404 kb on + strand, within H281DRAFT_00222 at 242.404 kb on + strand, within H281DRAFT_00222 at 242.438 kb on + strand, within H281DRAFT_00222 at 242.445 kb on - strand, within H281DRAFT_00222 at 242.588 kb on + strand at 242.589 kb on - strand at 242.629 kb on - strand at 242.671 kb on + strand at 242.843 kb on + strand, within H281DRAFT_00223 at 242.992 kb on + strand, within H281DRAFT_00223 at 242.993 kb on - strand, within H281DRAFT_00223 at 243.067 kb on - strand, within H281DRAFT_00223 at 243.103 kb on + strand, within H281DRAFT_00223 at 243.103 kb on + strand, within H281DRAFT_00223 at 243.103 kb on + strand, within H281DRAFT_00223 at 243.314 kb on + strand at 243.379 kb on + strand at 243.502 kb on - strand at 243.502 kb on - strand at 243.636 kb on + strand at 243.636 kb on + strand at 243.636 kb on + strand at 243.637 kb on - strand at 243.904 kb on - strand, within H281DRAFT_00224 at 243.904 kb on - strand, within H281DRAFT_00224
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 241,893 - -1.2 242,000 + H281DRAFT_00222 0.12 +0.6 242,001 - H281DRAFT_00222 0.12 -3.3 242,040 - H281DRAFT_00222 0.18 +1.8 242,142 - H281DRAFT_00222 0.32 -0.5 242,144 + H281DRAFT_00222 0.32 +0.4 242,145 - H281DRAFT_00222 0.32 +1.2 242,190 - H281DRAFT_00222 0.39 +0.1 242,213 + H281DRAFT_00222 0.42 -1.2 242,280 + H281DRAFT_00222 0.51 +1.2 242,325 + H281DRAFT_00222 0.57 -0.8 242,326 - H281DRAFT_00222 0.58 +0.2 242,381 + H281DRAFT_00222 0.65 +1.4 242,404 + H281DRAFT_00222 0.68 +0.9 242,404 + H281DRAFT_00222 0.68 +1.0 242,438 + H281DRAFT_00222 0.73 +0.1 242,445 - H281DRAFT_00222 0.74 +0.6 242,588 + -0.1 242,589 - +0.5 242,629 - +1.7 242,671 + -1.0 242,843 + H281DRAFT_00223 0.32 +0.3 242,992 + H281DRAFT_00223 0.53 +1.1 242,993 - H281DRAFT_00223 0.53 +0.0 243,067 - H281DRAFT_00223 0.64 +0.8 243,103 + H281DRAFT_00223 0.69 +0.6 243,103 + H281DRAFT_00223 0.69 +0.9 243,103 + H281DRAFT_00223 0.69 +0.3 243,314 + +0.4 243,379 + -0.1 243,502 - -0.9 243,502 - +0.6 243,636 + +0.6 243,636 + +3.3 243,636 + +2.2 243,637 - -0.3 243,904 - H281DRAFT_00224 0.36 -0.1 243,904 - H281DRAFT_00224 0.36 -0.7
Or see this region's nucleotide sequence