Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00217 and H281DRAFT_00218 are separated by 156 nucleotides H281DRAFT_00218 and H281DRAFT_00219 are separated by 148 nucleotides H281DRAFT_00219 and H281DRAFT_00220 are separated by 231 nucleotides
H281DRAFT_00217: H281DRAFT_00217 - hypothetical protein, at 235,564 to 236,733
_00217
H281DRAFT_00218: H281DRAFT_00218 - NAD+ synthase (glutamine-hydrolysing), at 236,890 to 238,635
_00218
H281DRAFT_00219: H281DRAFT_00219 - nitrogen regulatory protein P-II family, at 238,784 to 239,122
_00219
H281DRAFT_00220: H281DRAFT_00220 - Outer membrane protein (porin), at 239,354 to 240,475
_00220
Position (kb) 236
237
238
239 Strain fitness (log2 ratio) -2
-1
0
1
2 at 235.991 kb on + strand, within H281DRAFT_00217 at 236.107 kb on + strand, within H281DRAFT_00217 at 236.107 kb on + strand, within H281DRAFT_00217 at 236.417 kb on + strand, within H281DRAFT_00217 at 236.438 kb on + strand, within H281DRAFT_00217 at 236.439 kb on - strand, within H281DRAFT_00217 at 236.469 kb on - strand, within H281DRAFT_00217 at 236.773 kb on + strand at 236.773 kb on + strand at 236.773 kb on + strand at 236.774 kb on - strand at 236.774 kb on - strand at 237.070 kb on + strand, within H281DRAFT_00218 at 237.192 kb on + strand, within H281DRAFT_00218 at 237.193 kb on - strand, within H281DRAFT_00218 at 237.193 kb on - strand, within H281DRAFT_00218 at 237.817 kb on + strand, within H281DRAFT_00218 at 237.818 kb on - strand at 238.214 kb on + strand at 238.406 kb on - strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.436 kb on - strand, within H281DRAFT_00218 at 238.436 kb on - strand, within H281DRAFT_00218 at 238.531 kb on + strand at 238.532 kb on - strand at 238.533 kb on + strand at 238.728 kb on - strand at 238.919 kb on + strand, within H281DRAFT_00219 at 238.919 kb on + strand, within H281DRAFT_00219 at 238.934 kb on + strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 239.121 kb on - strand at 239.245 kb on + strand at 239.422 kb on - strand at 239.425 kb on + strand at 239.553 kb on + strand, within H281DRAFT_00220 at 239.572 kb on - strand, within H281DRAFT_00220 at 239.613 kb on + strand, within H281DRAFT_00220 at 239.613 kb on + strand, within H281DRAFT_00220 at 239.614 kb on - strand, within H281DRAFT_00220
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 235,991 + H281DRAFT_00217 0.36 -0.1 236,107 + H281DRAFT_00217 0.46 +0.5 236,107 + H281DRAFT_00217 0.46 +1.2 236,417 + H281DRAFT_00217 0.73 -0.2 236,438 + H281DRAFT_00217 0.75 -0.7 236,439 - H281DRAFT_00217 0.75 -0.2 236,469 - H281DRAFT_00217 0.77 -0.7 236,773 + -0.6 236,773 + -0.3 236,773 + -0.4 236,774 - +2.4 236,774 - -0.3 237,070 + H281DRAFT_00218 0.10 +0.3 237,192 + H281DRAFT_00218 0.17 -0.6 237,193 - H281DRAFT_00218 0.17 +0.8 237,193 - H281DRAFT_00218 0.17 -0.3 237,817 + H281DRAFT_00218 0.53 -1.0 237,818 - -0.2 238,214 + +1.4 238,406 - H281DRAFT_00218 0.87 +1.0 238,435 + H281DRAFT_00218 0.88 +0.2 238,435 + H281DRAFT_00218 0.88 +0.3 238,435 + H281DRAFT_00218 0.88 -0.3 238,436 - H281DRAFT_00218 0.89 -0.4 238,436 - H281DRAFT_00218 0.89 +0.4 238,531 + +1.6 238,532 - +0.8 238,533 + -0.6 238,728 - -0.0 238,919 + H281DRAFT_00219 0.40 -1.4 238,919 + H281DRAFT_00219 0.40 -0.3 238,934 + H281DRAFT_00219 0.44 -0.2 238,935 - H281DRAFT_00219 0.45 -1.0 238,935 - H281DRAFT_00219 0.45 -1.2 238,935 - H281DRAFT_00219 0.45 -0.7 239,121 - -0.0 239,245 + -1.4 239,422 - -2.1 239,425 + -1.1 239,553 + H281DRAFT_00220 0.18 -1.2 239,572 - H281DRAFT_00220 0.19 -1.0 239,613 + H281DRAFT_00220 0.23 +0.2 239,613 + H281DRAFT_00220 0.23 -2.6 239,614 - H281DRAFT_00220 0.23 -1.4
Or see this region's nucleotide sequence