Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00122 and H281DRAFT_00123 are separated by 137 nucleotides H281DRAFT_00123 and H281DRAFT_00124 are separated by 79 nucleotides H281DRAFT_00124 and H281DRAFT_00125 are separated by 90 nucleotides
H281DRAFT_00122: H281DRAFT_00122 - lipopolysaccharide export system permease protein, at 129,414 to 130,511
_00122
H281DRAFT_00123: H281DRAFT_00123 - aminopeptidase A. Metallo peptidase. MEROPS family M17, at 130,649 to 132,160
_00123
H281DRAFT_00124: H281DRAFT_00124 - DNA polymerase III, chi subunit, at 132,240 to 132,656
_00124
H281DRAFT_00125: H281DRAFT_00125 - Protein of unknown function (DUF2486), at 132,747 to 133,460
_00125
Position (kb) 130
131
132
133 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 130.513 kb on - strand at 130.513 kb on - strand at 130.663 kb on - strand at 130.899 kb on + strand at 130.899 kb on + strand, within H281DRAFT_00123 at 131.086 kb on + strand, within H281DRAFT_00123 at 131.274 kb on - strand, within H281DRAFT_00123 at 131.936 kb on + strand, within H281DRAFT_00123 at 132.609 kb on + strand, within H281DRAFT_00124 at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.639 kb on + strand at 132.640 kb on - strand at 132.704 kb on + strand at 132.705 kb on - strand at 132.734 kb on - strand at 132.765 kb on - strand at 133.100 kb on + strand, within H281DRAFT_00125 at 133.100 kb on + strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125 at 133.101 kb on - strand, within H281DRAFT_00125
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 130,513 - +0.6 130,513 - +0.0 130,663 - -0.5 130,899 + +0.8 130,899 + H281DRAFT_00123 0.17 -2.8 131,086 + H281DRAFT_00123 0.29 -0.9 131,274 - H281DRAFT_00123 0.41 -2.9 131,936 + H281DRAFT_00123 0.85 -0.7 132,609 + H281DRAFT_00124 0.88 -1.2 132,639 + -2.1 132,639 + +0.0 132,639 + -2.3 132,639 + -2.9 132,639 + -2.9 132,639 + -2.3 132,640 - -3.4 132,704 + -0.1 132,705 - +0.2 132,734 - -1.0 132,765 - +0.7 133,100 + H281DRAFT_00125 0.49 +0.1 133,100 + H281DRAFT_00125 0.49 +1.8 133,101 - H281DRAFT_00125 0.50 +0.7 133,101 - H281DRAFT_00125 0.50 +0.2 133,101 - H281DRAFT_00125 0.50 +0.7 133,101 - H281DRAFT_00125 0.50 +1.8
Or see this region's nucleotide sequence