Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00110 and H281DRAFT_00111 are separated by 15 nucleotides H281DRAFT_00111 and H281DRAFT_00112 are separated by 223 nucleotides
H281DRAFT_00110: H281DRAFT_00110 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 114,529 to 117,723
_00110
H281DRAFT_00111: H281DRAFT_00111 - RND family efflux transporter, MFP subunit, at 117,739 to 118,962
_00111
H281DRAFT_00112: H281DRAFT_00112 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 119,186 to 120,346
_00112
Position (kb) 117
118
119 Strain fitness (log2 ratio) -1
0
1
2 at 117.318 kb on + strand at 117.318 kb on + strand, within H281DRAFT_00110 at 117.319 kb on - strand, within H281DRAFT_00110 at 117.340 kb on + strand, within H281DRAFT_00110 at 117.653 kb on - strand at 117.653 kb on - strand at 117.849 kb on + strand at 117.850 kb on - strand at 117.850 kb on - strand at 117.850 kb on - strand at 118.013 kb on + strand, within H281DRAFT_00111 at 118.021 kb on - strand, within H281DRAFT_00111 at 118.092 kb on + strand, within H281DRAFT_00111 at 118.093 kb on - strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.213 kb on + strand, within H281DRAFT_00111 at 118.487 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.767 kb on + strand, within H281DRAFT_00111 at 118.958 kb on - strand at 119.117 kb on + strand at 119.118 kb on - strand at 119.118 kb on - strand at 119.255 kb on + strand at 119.406 kb on + strand, within H281DRAFT_00112 at 119.455 kb on - strand, within H281DRAFT_00112 at 119.761 kb on + strand, within H281DRAFT_00112 at 119.762 kb on - strand, within H281DRAFT_00112 at 119.838 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 117,318 + -0.2 117,318 + H281DRAFT_00110 0.87 +0.6 117,319 - H281DRAFT_00110 0.87 -0.0 117,340 + H281DRAFT_00110 0.88 +0.8 117,653 - -0.6 117,653 - +0.2 117,849 + -0.2 117,850 - -0.5 117,850 - +0.1 117,850 - -1.1 118,013 + H281DRAFT_00111 0.22 -0.2 118,021 - H281DRAFT_00111 0.23 +0.9 118,092 + H281DRAFT_00111 0.29 +0.7 118,093 - H281DRAFT_00111 0.29 -0.6 118,151 + H281DRAFT_00111 0.34 +0.1 118,151 + H281DRAFT_00111 0.34 -0.1 118,152 - H281DRAFT_00111 0.34 -0.3 118,152 - H281DRAFT_00111 0.34 -0.3 118,213 + H281DRAFT_00111 0.39 +0.2 118,487 + H281DRAFT_00111 0.61 +0.4 118,634 + H281DRAFT_00111 0.73 +1.6 118,634 + H281DRAFT_00111 0.73 +0.3 118,767 + H281DRAFT_00111 0.84 +0.5 118,958 - +0.1 119,117 + -0.1 119,118 - +0.6 119,118 - -0.4 119,255 + -0.1 119,406 + H281DRAFT_00112 0.19 -0.1 119,455 - H281DRAFT_00112 0.23 -0.5 119,761 + H281DRAFT_00112 0.50 -0.5 119,762 - H281DRAFT_00112 0.50 +1.1 119,838 + H281DRAFT_00112 0.56 +0.0 119,892 + H281DRAFT_00112 0.61 -0.8 119,892 + H281DRAFT_00112 0.61 +2.4
Or see this region's nucleotide sequence