Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00063 and H281DRAFT_00064 are separated by 135 nucleotides H281DRAFT_00064 and H281DRAFT_00065 are separated by 24 nucleotides H281DRAFT_00065 and H281DRAFT_00066 are separated by 77 nucleotides H281DRAFT_00066 and H281DRAFT_00067 are separated by 426 nucleotides
H281DRAFT_00063: H281DRAFT_00063 - hypothetical protein, at 65,252 to 65,557
_00063
H281DRAFT_00064: H281DRAFT_00064 - hypothetical protein, at 65,693 to 66,235
_00064
H281DRAFT_00065: H281DRAFT_00065 - hypothetical protein, at 66,260 to 66,358
_00065
H281DRAFT_00066: H281DRAFT_00066 - hypothetical protein, at 66,436 to 67,059
_00066
H281DRAFT_00067: H281DRAFT_00067 - transposase, IS4 family, at 67,486 to 68,394
_00067
Position (kb)
66
67
68 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 65.439 kb on + strand, within H281DRAFT_00063 at 65.441 kb on + strand, within H281DRAFT_00063 at 65.442 kb on - strand at 65.442 kb on - strand, within H281DRAFT_00063 at 65.494 kb on - strand, within H281DRAFT_00063 at 65.585 kb on + strand at 65.586 kb on - strand at 65.586 kb on - strand at 65.590 kb on - strand at 65.644 kb on + strand at 65.677 kb on + strand at 65.678 kb on - strand at 65.745 kb on - strand at 65.859 kb on - strand, within H281DRAFT_00064 at 65.920 kb on + strand, within H281DRAFT_00064 at 65.973 kb on + strand, within H281DRAFT_00064 at 65.997 kb on + strand, within H281DRAFT_00064 at 66.240 kb on + strand at 66.273 kb on - strand, within H281DRAFT_00065 at 66.356 kb on + strand at 66.356 kb on + strand at 66.867 kb on + strand, within H281DRAFT_00066 at 66.985 kb on + strand, within H281DRAFT_00066 at 67.058 kb on - strand at 67.206 kb on + strand at 67.257 kb on + strand at 67.257 kb on + strand at 67.376 kb on - strand at 67.376 kb on - strand at 67.377 kb on + strand at 67.443 kb on - strand at 67.464 kb on + strand at 67.492 kb on - strand at 67.559 kb on + strand at 67.729 kb on + strand, within H281DRAFT_00067 at 67.990 kb on - strand, within H281DRAFT_00067 at 68.027 kb on + strand, within H281DRAFT_00067 at 68.028 kb on - strand, within H281DRAFT_00067
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 65,439 + H281DRAFT_00063 0.61 -0.5 65,441 + H281DRAFT_00063 0.62 -0.1 65,442 - +1.8 65,442 - H281DRAFT_00063 0.62 +0.2 65,494 - H281DRAFT_00063 0.79 -0.2 65,585 + +0.3 65,586 - -0.4 65,586 - -3.1 65,590 - +0.2 65,644 + +0.7 65,677 + -0.6 65,678 - +0.6 65,745 - -0.3 65,859 - H281DRAFT_00064 0.31 -1.5 65,920 + H281DRAFT_00064 0.42 +0.7 65,973 + H281DRAFT_00064 0.52 +0.1 65,997 + H281DRAFT_00064 0.56 -1.4 66,240 + -1.3 66,273 - H281DRAFT_00065 0.13 -0.3 66,356 + +0.1 66,356 + +1.5 66,867 + H281DRAFT_00066 0.69 +0.3 66,985 + H281DRAFT_00066 0.88 +0.4 67,058 - -0.2 67,206 + -0.3 67,257 + +0.8 67,257 + -0.2 67,376 - +0.4 67,376 - -0.1 67,377 + -0.3 67,443 - -0.7 67,464 + +0.4 67,492 - -0.8 67,559 + +0.3 67,729 + H281DRAFT_00067 0.27 +0.6 67,990 - H281DRAFT_00067 0.55 -1.0 68,027 + H281DRAFT_00067 0.60 +0.3 68,028 - H281DRAFT_00067 0.60 -0.4
Or see this region's nucleotide sequence