Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00037 and H281DRAFT_00038 are separated by 273 nucleotides H281DRAFT_00038 and H281DRAFT_00039 are separated by 130 nucleotides
H281DRAFT_00037: H281DRAFT_00037 - NAD(P)H dehydrogenase (quinone), at 41,671 to 42,525
_00037
H281DRAFT_00038: H281DRAFT_00038 - transcriptional regulator, HxlR family, at 42,799 to 43,140
_00038
H281DRAFT_00039: H281DRAFT_00039 - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases, at 43,271 to 43,609
_00039
Position (kb) 43
44 Strain fitness (log2 ratio) -1
0
1
2 at 42.319 kb on + strand, within H281DRAFT_00037 at 42.368 kb on + strand, within H281DRAFT_00037 at 42.369 kb on - strand, within H281DRAFT_00037 at 42.545 kb on + strand at 42.625 kb on - strand at 42.691 kb on + strand at 42.691 kb on + strand at 42.691 kb on + strand at 42.695 kb on - strand at 42.716 kb on - strand at 42.728 kb on - strand at 42.892 kb on + strand, within H281DRAFT_00038 at 42.970 kb on - strand, within H281DRAFT_00038 at 42.970 kb on - strand, within H281DRAFT_00038 at 43.045 kb on + strand, within H281DRAFT_00038 at 43.058 kb on + strand, within H281DRAFT_00038 at 43.151 kb on + strand at 43.151 kb on + strand at 43.151 kb on + strand at 43.151 kb on + strand at 43.153 kb on + strand at 43.153 kb on + strand at 43.199 kb on + strand at 43.263 kb on + strand at 43.272 kb on + strand at 43.272 kb on + strand at 43.272 kb on + strand at 43.273 kb on - strand at 43.273 kb on - strand at 43.276 kb on + strand at 43.498 kb on - strand, within H281DRAFT_00039 at 43.498 kb on - strand, within H281DRAFT_00039 at 43.609 kb on + strand at 43.634 kb on - strand at 43.828 kb on - strand at 43.828 kb on - strand at 43.834 kb on - strand at 43.996 kb on + strand at 43.997 kb on - strand at 43.998 kb on + strand at 43.998 kb on + strand at 43.998 kb on + strand at 43.999 kb on - strand at 44.002 kb on + strand at 44.003 kb on - strand at 44.003 kb on - strand at 44.003 kb on - strand at 44.168 kb on + strand at 44.177 kb on - strand at 44.262 kb on - strand at 44.271 kb on + strand at 44.324 kb on + strand at 44.406 kb on + strand at 44.457 kb on - strand at 44.458 kb on + strand at 44.489 kb on - strand at 44.489 kb on - strand at 44.518 kb on + strand at 44.520 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 42,319 + H281DRAFT_00037 0.76 -0.3 42,368 + H281DRAFT_00037 0.82 -0.4 42,369 - H281DRAFT_00037 0.82 -0.1 42,545 + +0.4 42,625 - -0.3 42,691 + +0.2 42,691 + -0.1 42,691 + +0.6 42,695 - +0.1 42,716 - -0.7 42,728 - -0.1 42,892 + H281DRAFT_00038 0.27 +0.2 42,970 - H281DRAFT_00038 0.50 -0.3 42,970 - H281DRAFT_00038 0.50 +0.3 43,045 + H281DRAFT_00038 0.72 -0.2 43,058 + H281DRAFT_00038 0.76 +0.1 43,151 + +0.2 43,151 + +0.2 43,151 + -0.2 43,151 + -0.0 43,153 + +0.8 43,153 + +0.5 43,199 + -0.4 43,263 + +0.9 43,272 + -0.3 43,272 + +2.2 43,272 + -0.7 43,273 - +0.3 43,273 - -0.3 43,276 + -0.3 43,498 - H281DRAFT_00039 0.67 -0.1 43,498 - H281DRAFT_00039 0.67 +0.7 43,609 + +0.0 43,634 - +0.2 43,828 - +0.3 43,828 - -0.2 43,834 - +0.9 43,996 + +0.0 43,997 - +0.1 43,998 + -0.0 43,998 + -0.6 43,998 + -0.7 43,999 - +0.5 44,002 + -0.2 44,003 - +0.2 44,003 - -0.4 44,003 - +0.4 44,168 + +0.4 44,177 - +1.1 44,262 - -0.1 44,271 + +0.1 44,324 + +0.8 44,406 + +0.4 44,457 - -0.3 44,458 + -0.3 44,489 - -1.0 44,489 - -0.3 44,518 + -0.4 44,520 + +0.7
Or see this region's nucleotide sequence