Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3439 and Dsui_3440 are separated by 127 nucleotides Dsui_3440 and Dsui_3441 overlap by 4 nucleotides Dsui_3441 and Dsui_3442 are separated by 26 nucleotides
Dsui_3439: Dsui_3439 - methyl-accepting chemotaxis protein, at 3,694,316 to 3,695,965
_3439
Dsui_3440: Dsui_3440 - Protein of unknown function (DUF2892), at 3,696,093 to 3,696,302
_3440
Dsui_3441: Dsui_3441 - cation/multidrug efflux pump, at 3,696,299 to 3,699,550
_3441
Dsui_3442: Dsui_3442 - NADH dehydrogenase, FAD-containing subunit, at 3,699,577 to 3,700,851
_3442
Position (kb)
3696
3697
3698
3699
3700 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3695.325 kb on - strand, within Dsui_3439 at 3695.611 kb on + strand, within Dsui_3439 at 3695.660 kb on + strand, within Dsui_3439 at 3695.683 kb on - strand, within Dsui_3439 at 3695.684 kb on - strand, within Dsui_3439 at 3695.730 kb on + strand, within Dsui_3439 at 3695.820 kb on - strand at 3695.925 kb on + strand at 3696.036 kb on - strand at 3696.115 kb on + strand at 3696.167 kb on - strand, within Dsui_3440 at 3696.255 kb on - strand, within Dsui_3440 at 3696.298 kb on - strand at 3696.313 kb on + strand at 3696.529 kb on - strand at 3696.559 kb on + strand at 3696.612 kb on - strand at 3696.679 kb on + strand at 3696.716 kb on - strand, within Dsui_3441 at 3696.751 kb on - strand, within Dsui_3441 at 3696.839 kb on - strand, within Dsui_3441 at 3696.885 kb on + strand, within Dsui_3441 at 3696.988 kb on - strand at 3697.092 kb on - strand, within Dsui_3441 at 3697.306 kb on + strand, within Dsui_3441 at 3697.309 kb on - strand, within Dsui_3441 at 3697.421 kb on + strand, within Dsui_3441 at 3697.564 kb on + strand, within Dsui_3441 at 3697.743 kb on + strand, within Dsui_3441 at 3697.751 kb on - strand, within Dsui_3441 at 3698.083 kb on - strand at 3698.083 kb on - strand at 3698.139 kb on - strand, within Dsui_3441 at 3698.304 kb on - strand at 3698.341 kb on + strand, within Dsui_3441 at 3698.598 kb on - strand, within Dsui_3441 at 3698.720 kb on - strand, within Dsui_3441 at 3698.722 kb on + strand, within Dsui_3441 at 3698.730 kb on - strand, within Dsui_3441 at 3698.836 kb on + strand at 3698.880 kb on - strand, within Dsui_3441 at 3699.169 kb on + strand at 3699.315 kb on - strand at 3699.415 kb on - strand at 3699.555 kb on + strand at 3699.606 kb on + strand at 3699.686 kb on + strand at 3699.751 kb on - strand at 3699.833 kb on - strand, within Dsui_3442 at 3699.895 kb on + strand at 3700.034 kb on - strand at 3700.046 kb on - strand, within Dsui_3442 at 3700.169 kb on - strand, within Dsui_3442 at 3700.184 kb on - strand at 3700.227 kb on - strand, within Dsui_3442 at 3700.257 kb on + strand, within Dsui_3442 at 3700.265 kb on - strand, within Dsui_3442 at 3700.286 kb on - strand, within Dsui_3442 at 3700.302 kb on - strand, within Dsui_3442 at 3700.302 kb on - strand, within Dsui_3442 at 3700.404 kb on + strand, within Dsui_3442 at 3700.530 kb on - strand, within Dsui_3442
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,695,325 - Dsui_3439 0.61 -0.0 3,695,611 + Dsui_3439 0.78 +0.2 3,695,660 + Dsui_3439 0.81 -0.2 3,695,683 - Dsui_3439 0.83 +1.3 3,695,684 - Dsui_3439 0.83 +1.2 3,695,730 + Dsui_3439 0.86 -4.2 3,695,820 - +0.8 3,695,925 + +0.5 3,696,036 - -1.6 3,696,115 + -2.8 3,696,167 - Dsui_3440 0.35 +0.1 3,696,255 - Dsui_3440 0.77 +0.1 3,696,298 - -3.5 3,696,313 + -1.9 3,696,529 - -2.9 3,696,559 + -0.6 3,696,612 - -1.5 3,696,679 + -2.2 3,696,716 - Dsui_3441 0.13 -0.8 3,696,751 - Dsui_3441 0.14 -0.6 3,696,839 - Dsui_3441 0.17 -5.1 3,696,885 + Dsui_3441 0.18 -0.2 3,696,988 - -2.2 3,697,092 - Dsui_3441 0.24 -2.8 3,697,306 + Dsui_3441 0.31 -2.8 3,697,309 - Dsui_3441 0.31 -2.2 3,697,421 + Dsui_3441 0.35 -0.2 3,697,564 + Dsui_3441 0.39 -1.8 3,697,743 + Dsui_3441 0.44 -2.8 3,697,751 - Dsui_3441 0.45 -2.9 3,698,083 - -1.3 3,698,083 - -1.9 3,698,139 - Dsui_3441 0.57 -0.5 3,698,304 - -2.2 3,698,341 + Dsui_3441 0.63 -0.5 3,698,598 - Dsui_3441 0.71 -0.8 3,698,720 - Dsui_3441 0.74 -2.3 3,698,722 + Dsui_3441 0.75 -3.5 3,698,730 - Dsui_3441 0.75 -3.3 3,698,836 + -2.7 3,698,880 - Dsui_3441 0.79 -5.0 3,699,169 + -0.4 3,699,315 - -1.1 3,699,415 - -0.8 3,699,555 + -1.0 3,699,606 + -0.7 3,699,686 + -1.0 3,699,751 - -2.2 3,699,833 - Dsui_3442 0.20 +0.0 3,699,895 + -2.9 3,700,034 - +1.1 3,700,046 - Dsui_3442 0.37 -0.8 3,700,169 - Dsui_3442 0.46 +0.3 3,700,184 - -1.7 3,700,227 - Dsui_3442 0.51 -0.9 3,700,257 + Dsui_3442 0.53 -2.4 3,700,265 - Dsui_3442 0.54 -1.4 3,700,286 - Dsui_3442 0.56 -0.8 3,700,302 - Dsui_3442 0.57 -0.6 3,700,302 - Dsui_3442 0.57 +0.5 3,700,404 + Dsui_3442 0.65 -2.6 3,700,530 - Dsui_3442 0.75 +1.3
Or see this region's nucleotide sequence