Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3414 and Dsui_3415 overlap by 4 nucleotides Dsui_3415 and Dsui_3416 overlap by 8 nucleotides Dsui_3416 and Dsui_3417 are separated by 56 nucleotides
Dsui_3414: Dsui_3414 - FAD/FMN-dependent dehydrogenase, at 3,666,517 to 3,667,617
_3414
Dsui_3415: Dsui_3415 - FAD/FMN-dependent dehydrogenase, at 3,667,614 to 3,669,074
_3415
Dsui_3416: Dsui_3416 - transcriptional regulator, at 3,669,067 to 3,669,876
_3416
Dsui_3417: Dsui_3417 - hypothetical protein, at 3,669,933 to 3,670,328
_3417
Position (kb)
3667
3668
3669
3670 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3666.652 kb on + strand, within Dsui_3414 at 3666.727 kb on + strand, within Dsui_3414 at 3666.755 kb on - strand, within Dsui_3414 at 3666.819 kb on + strand, within Dsui_3414 at 3666.856 kb on - strand, within Dsui_3414 at 3666.922 kb on + strand, within Dsui_3414 at 3667.048 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand at 3667.069 kb on - strand, within Dsui_3414 at 3667.069 kb on - strand, within Dsui_3414 at 3667.106 kb on + strand at 3667.230 kb on - strand, within Dsui_3414 at 3667.237 kb on - strand, within Dsui_3414 at 3667.278 kb on - strand, within Dsui_3414 at 3667.378 kb on - strand, within Dsui_3414 at 3667.384 kb on - strand, within Dsui_3414 at 3667.419 kb on - strand, within Dsui_3414 at 3667.509 kb on - strand at 3667.564 kb on + strand at 3667.582 kb on - strand at 3667.679 kb on - strand at 3667.700 kb on + strand at 3667.708 kb on - strand at 3667.752 kb on - strand at 3667.752 kb on - strand at 3667.769 kb on - strand, within Dsui_3415 at 3667.820 kb on - strand, within Dsui_3415 at 3667.825 kb on - strand, within Dsui_3415 at 3667.829 kb on + strand, within Dsui_3415 at 3667.922 kb on - strand, within Dsui_3415 at 3667.934 kb on + strand, within Dsui_3415 at 3667.977 kb on + strand, within Dsui_3415 at 3668.007 kb on - strand, within Dsui_3415 at 3668.080 kb on + strand at 3668.088 kb on - strand, within Dsui_3415 at 3668.088 kb on - strand, within Dsui_3415 at 3668.137 kb on + strand, within Dsui_3415 at 3668.256 kb on - strand, within Dsui_3415 at 3668.341 kb on - strand, within Dsui_3415 at 3668.370 kb on - strand, within Dsui_3415 at 3668.385 kb on - strand, within Dsui_3415 at 3668.395 kb on - strand, within Dsui_3415 at 3668.522 kb on + strand, within Dsui_3415 at 3668.643 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.743 kb on - strand, within Dsui_3415 at 3668.872 kb on - strand, within Dsui_3415 at 3668.921 kb on + strand, within Dsui_3415 at 3668.985 kb on - strand at 3669.073 kb on - strand at 3669.221 kb on + strand, within Dsui_3416 at 3669.221 kb on + strand at 3669.431 kb on + strand at 3669.516 kb on - strand, within Dsui_3416 at 3669.576 kb on + strand at 3669.673 kb on + strand at 3669.828 kb on + strand at 3669.830 kb on - strand at 3669.912 kb on - strand at 3669.960 kb on - strand at 3670.048 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,666,652 + Dsui_3414 0.12 -2.0 3,666,727 + Dsui_3414 0.19 -1.6 3,666,755 - Dsui_3414 0.22 -1.8 3,666,819 + Dsui_3414 0.27 -4.4 3,666,856 - Dsui_3414 0.31 -4.5 3,666,922 + Dsui_3414 0.37 -0.4 3,667,048 + Dsui_3414 0.48 -4.1 3,667,055 + Dsui_3414 0.49 -0.4 3,667,055 + -1.9 3,667,069 - Dsui_3414 0.50 +0.8 3,667,069 - Dsui_3414 0.50 -1.0 3,667,106 + +0.1 3,667,230 - Dsui_3414 0.65 -3.1 3,667,237 - Dsui_3414 0.65 +1.1 3,667,278 - Dsui_3414 0.69 -2.0 3,667,378 - Dsui_3414 0.78 -0.7 3,667,384 - Dsui_3414 0.79 -1.6 3,667,419 - Dsui_3414 0.82 -0.8 3,667,509 - -0.9 3,667,564 + +0.3 3,667,582 - -1.1 3,667,679 - -3.0 3,667,700 + -1.9 3,667,708 - -1.4 3,667,752 - +0.2 3,667,752 - -3.4 3,667,769 - Dsui_3415 0.11 -2.0 3,667,820 - Dsui_3415 0.14 -0.0 3,667,825 - Dsui_3415 0.14 +0.9 3,667,829 + Dsui_3415 0.15 -2.8 3,667,922 - Dsui_3415 0.21 -0.8 3,667,934 + Dsui_3415 0.22 -2.6 3,667,977 + Dsui_3415 0.25 -5.3 3,668,007 - Dsui_3415 0.27 -3.2 3,668,080 + -1.3 3,668,088 - Dsui_3415 0.32 -2.9 3,668,088 - Dsui_3415 0.32 -2.6 3,668,137 + Dsui_3415 0.36 -3.0 3,668,256 - Dsui_3415 0.44 -0.3 3,668,341 - Dsui_3415 0.50 +0.5 3,668,370 - Dsui_3415 0.52 -3.7 3,668,385 - Dsui_3415 0.53 -1.6 3,668,395 - Dsui_3415 0.53 -0.1 3,668,522 + Dsui_3415 0.62 -2.0 3,668,643 - Dsui_3415 0.70 -0.1 3,668,720 - Dsui_3415 0.76 +0.4 3,668,720 - Dsui_3415 0.76 +1.4 3,668,720 - Dsui_3415 0.76 +0.1 3,668,743 - Dsui_3415 0.77 -1.2 3,668,872 - Dsui_3415 0.86 -0.6 3,668,921 + Dsui_3415 0.89 -3.3 3,668,985 - -0.4 3,669,073 - -0.3 3,669,221 + Dsui_3416 0.19 -0.2 3,669,221 + -2.5 3,669,431 + -2.4 3,669,516 - Dsui_3416 0.55 +1.2 3,669,576 + -3.7 3,669,673 + -1.7 3,669,828 + -1.5 3,669,830 - +0.9 3,669,912 - -3.3 3,669,960 - -2.8 3,670,048 + -0.7
Or see this region's nucleotide sequence