Strain Fitness in Dechlorosoma suillum PS around Dsui_2842

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2841 and Dsui_2842 overlap by 4 nucleotidesDsui_2842 and Dsui_2843 are separated by 536 nucleotides Dsui_2841: Dsui_2841 - His-Xaa-Ser repeat-associated upstream radical SAM protein, at 3,017,645 to 3,019,105 _2841 Dsui_2842: Dsui_2842 - radical SAM pair-associated protein, at 3,019,102 to 3,019,392 _2842 Dsui_2843: Dsui_2843 - hypothetical protein, at 3,019,929 to 3,021,314 _2843 Position (kb) 3019 3020Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 3018.102 kb on - strand, within Dsui_2841at 3018.117 kb on + strand, within Dsui_2841at 3018.140 kb on - strand, within Dsui_2841at 3018.140 kb on - strand, within Dsui_2841at 3018.140 kb on - strand, within Dsui_2841at 3018.140 kb on - strand, within Dsui_2841at 3018.162 kb on - strand, within Dsui_2841at 3018.190 kb on - strand, within Dsui_2841at 3018.193 kb on - strand, within Dsui_2841at 3018.195 kb on - strand, within Dsui_2841at 3018.195 kb on - strand, within Dsui_2841at 3018.202 kb on - strand, within Dsui_2841at 3018.202 kb on - strand, within Dsui_2841at 3018.218 kb on - strand, within Dsui_2841at 3018.223 kb on + strand, within Dsui_2841at 3018.231 kb on - strand, within Dsui_2841at 3018.231 kb on - strand, within Dsui_2841at 3018.238 kb on - strand, within Dsui_2841at 3018.238 kb on - strand, within Dsui_2841at 3018.269 kb on + strand, within Dsui_2841at 3018.271 kb on - strand, within Dsui_2841at 3018.385 kb on - strand, within Dsui_2841at 3018.418 kb on + strand, within Dsui_2841at 3018.425 kb on - strand, within Dsui_2841at 3018.445 kb on + strand, within Dsui_2841at 3018.462 kb on - strand, within Dsui_2841at 3018.472 kb on + strand, within Dsui_2841at 3018.472 kb on + strand, within Dsui_2841at 3018.475 kb on - strand, within Dsui_2841at 3018.480 kb on - strand, within Dsui_2841at 3018.508 kb on + strand, within Dsui_2841at 3018.528 kb on - strand, within Dsui_2841at 3018.564 kb on + strand, within Dsui_2841at 3018.564 kb on + strand, within Dsui_2841at 3018.575 kb on - strand, within Dsui_2841at 3018.633 kb on - strand, within Dsui_2841at 3018.682 kb on - strand, within Dsui_2841at 3018.689 kb on - strand, within Dsui_2841at 3018.750 kb on + strand, within Dsui_2841at 3018.764 kb on + strand, within Dsui_2841at 3018.777 kb on - strand, within Dsui_2841at 3018.827 kb on - strand, within Dsui_2841at 3018.829 kb on + strand, within Dsui_2841at 3018.829 kb on + strand, within Dsui_2841at 3018.829 kb on + strand, within Dsui_2841at 3018.829 kb on + strand, within Dsui_2841at 3018.829 kb on + strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.837 kb on - strand, within Dsui_2841at 3018.842 kb on - strand, within Dsui_2841at 3018.856 kb on + strand, within Dsui_2841at 3018.856 kb on + strand, within Dsui_2841at 3018.861 kb on + strand, within Dsui_2841at 3018.864 kb on - strand, within Dsui_2841at 3018.864 kb on - strand, within Dsui_2841at 3018.868 kb on + strand, within Dsui_2841at 3018.869 kb on - strand, within Dsui_2841at 3018.869 kb on - strand, within Dsui_2841at 3018.881 kb on - strand, within Dsui_2841at 3018.887 kb on - strand, within Dsui_2841at 3018.887 kb on - strand, within Dsui_2841at 3018.889 kb on + strand, within Dsui_2841at 3018.917 kb on + strand, within Dsui_2841at 3018.930 kb on + strand, within Dsui_2841at 3018.938 kb on - strand, within Dsui_2841at 3018.956 kb on - strand, within Dsui_2841at 3018.986 kb on + strandat 3019.005 kb on + strandat 3019.020 kb on + strandat 3019.020 kb on + strandat 3019.028 kb on - strandat 3019.028 kb on - strandat 3019.058 kb on + strandat 3019.058 kb on + strandat 3019.068 kb on + strandat 3019.081 kb on + strandat 3019.081 kb on + strandat 3019.089 kb on + strandat 3019.113 kb on + strandat 3019.118 kb on + strandat 3019.118 kb on + strandat 3019.129 kb on + strandat 3019.130 kb on + strandat 3019.130 kb on + strandat 3019.130 kb on + strandat 3019.135 kb on + strand, within Dsui_2842at 3019.138 kb on - strand, within Dsui_2842at 3019.138 kb on - strand, within Dsui_2842at 3019.208 kb on + strand, within Dsui_2842at 3019.219 kb on + strand, within Dsui_2842at 3019.249 kb on + strand, within Dsui_2842at 3019.257 kb on - strandat 3019.257 kb on - strand, within Dsui_2842at 3019.312 kb on - strand, within Dsui_2842at 3019.315 kb on - strand, within Dsui_2842at 3019.344 kb on - strand, within Dsui_2842at 3019.368 kb on + strandat 3019.381 kb on - strandat 3019.381 kb on - strandat 3019.400 kb on - strandat 3019.446 kb on - strandat 3019.451 kb on + strandat 3019.459 kb on - strandat 3019.459 kb on - strandat 3019.482 kb on + strandat 3019.488 kb on - strandat 3019.497 kb on - strandat 3019.499 kb on - strandat 3019.534 kb on - strandat 3019.540 kb on + strandat 3019.543 kb on - strandat 3019.562 kb on - strandat 3019.567 kb on + strandat 3019.595 kb on - strandat 3019.625 kb on + strandat 3019.633 kb on - strandat 3019.633 kb on - strandat 3019.681 kb on - strandat 3019.712 kb on + strandat 3019.772 kb on + strandat 3019.882 kb on - strandat 3019.899 kb on + strandat 3019.899 kb on + strandat 3019.899 kb on + strandat 3019.907 kb on - strandat 3019.907 kb on - strandat 3019.914 kb on - strandat 3019.953 kb on + strandat 3019.958 kb on + strandat 3019.958 kb on + strandat 3019.963 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.012 kb on + strandat 3020.017 kb on + strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.020 kb on - strandat 3020.022 kb on + strandat 3020.022 kb on + strandat 3020.027 kb on + strandat 3020.030 kb on - strandat 3020.030 kb on - strandat 3020.030 kb on - strandat 3020.048 kb on + strandat 3020.056 kb on - strandat 3020.060 kb on + strandat 3020.060 kb on + strandat 3020.068 kb on - strand, within Dsui_2843at 3020.068 kb on - strand, within Dsui_2843at 3020.135 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.202 kb on + strand, within Dsui_2843at 3020.206 kb on + strand, within Dsui_2843at 3020.210 kb on - strand, within Dsui_2843at 3020.210 kb on - strand, within Dsui_2843at 3020.212 kb on + strand, within Dsui_2843at 3020.212 kb on + strand, within Dsui_2843at 3020.212 kb on + strand, within Dsui_2843at 3020.247 kb on - strand, within Dsui_2843at 3020.264 kb on + strand, within Dsui_2843at 3020.272 kb on - strand, within Dsui_2843at 3020.272 kb on - strand, within Dsui_2843at 3020.288 kb on + strand, within Dsui_2843at 3020.301 kb on - strand, within Dsui_2843at 3020.301 kb on - strand, within Dsui_2843at 3020.306 kb on - strand, within Dsui_2843at 3020.310 kb on + strand, within Dsui_2843at 3020.319 kb on + strand, within Dsui_2843at 3020.332 kb on - strandat 3020.371 kb on - strand, within Dsui_2843at 3020.371 kb on - strand, within Dsui_2843at 3020.372 kb on - strand, within Dsui_2843

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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3,018,102 - Dsui_2841 0.31 +0.0
3,018,117 + Dsui_2841 0.32 -0.6
3,018,140 - Dsui_2841 0.34 -1.1
3,018,140 - Dsui_2841 0.34 -3.1
3,018,140 - Dsui_2841 0.34 -2.6
3,018,140 - Dsui_2841 0.34 -3.6
3,018,162 - Dsui_2841 0.35 +0.1
3,018,190 - Dsui_2841 0.37 +0.2
3,018,193 - Dsui_2841 0.38 +0.6
3,018,195 - Dsui_2841 0.38 -0.2
3,018,195 - Dsui_2841 0.38 -0.4
3,018,202 - Dsui_2841 0.38 +0.1
3,018,202 - Dsui_2841 0.38 -0.9
3,018,218 - Dsui_2841 0.39 -1.9
3,018,223 + Dsui_2841 0.40 -3.6
3,018,231 - Dsui_2841 0.40 +0.0
3,018,231 - Dsui_2841 0.40 +0.4
3,018,238 - Dsui_2841 0.41 -0.1
3,018,238 - Dsui_2841 0.41 +0.6
3,018,269 + Dsui_2841 0.43 -0.4
3,018,271 - Dsui_2841 0.43 -1.1
3,018,385 - Dsui_2841 0.51 -0.7
3,018,418 + Dsui_2841 0.53 -1.2
3,018,425 - Dsui_2841 0.53 -2.7
3,018,445 + Dsui_2841 0.55 -3.1
3,018,462 - Dsui_2841 0.56 -0.4
3,018,472 + Dsui_2841 0.57 -2.8
3,018,472 + Dsui_2841 0.57 -2.0
3,018,475 - Dsui_2841 0.57 +0.7
3,018,480 - Dsui_2841 0.57 -0.1
3,018,508 + Dsui_2841 0.59 -1.1
3,018,528 - Dsui_2841 0.60 -0.9
3,018,564 + Dsui_2841 0.63 -3.2
3,018,564 + Dsui_2841 0.63 -1.9
3,018,575 - Dsui_2841 0.64 -0.2
3,018,633 - Dsui_2841 0.68 -1.3
3,018,682 - Dsui_2841 0.71 -0.3
3,018,689 - Dsui_2841 0.71 -0.1
3,018,750 + Dsui_2841 0.76 +2.0
3,018,764 + Dsui_2841 0.77 -1.7
3,018,777 - Dsui_2841 0.77 -1.3
3,018,827 - Dsui_2841 0.81 -2.4
3,018,829 + Dsui_2841 0.81 +0.1
3,018,829 + Dsui_2841 0.81 -3.4
3,018,829 + Dsui_2841 0.81 -1.1
3,018,829 + Dsui_2841 0.81 -0.3
3,018,829 + Dsui_2841 0.81 -1.8
3,018,837 - Dsui_2841 0.82 +0.2
3,018,837 - Dsui_2841 0.82 +0.0
3,018,837 - Dsui_2841 0.82 -0.7
3,018,837 - Dsui_2841 0.82 -1.5
3,018,837 - Dsui_2841 0.82 +0.4
3,018,837 - Dsui_2841 0.82 -0.4
3,018,837 - Dsui_2841 0.82 +0.2
3,018,837 - Dsui_2841 0.82 +0.3
3,018,837 - Dsui_2841 0.82 -0.8
3,018,837 - Dsui_2841 0.82 -0.4
3,018,837 - Dsui_2841 0.82 -2.3
3,018,837 - Dsui_2841 0.82 +0.1
3,018,837 - Dsui_2841 0.82 -1.1
3,018,837 - Dsui_2841 0.82 -0.2
3,018,842 - Dsui_2841 0.82 +1.9
3,018,856 + Dsui_2841 0.83 -4.8
3,018,856 + Dsui_2841 0.83 -1.1
3,018,861 + Dsui_2841 0.83 +0.2
3,018,864 - Dsui_2841 0.83 -0.5
3,018,864 - Dsui_2841 0.83 -0.6
3,018,868 + Dsui_2841 0.84 -0.7
3,018,869 - Dsui_2841 0.84 -0.6
3,018,869 - Dsui_2841 0.84 -1.9
3,018,881 - Dsui_2841 0.85 +1.6
3,018,887 - Dsui_2841 0.85 +1.3
3,018,887 - Dsui_2841 0.85 +1.5
3,018,889 + Dsui_2841 0.85 -0.3
3,018,917 + Dsui_2841 0.87 -0.5
3,018,930 + Dsui_2841 0.88 -1.9
3,018,938 - Dsui_2841 0.89 -1.5
3,018,956 - Dsui_2841 0.90 -2.4
3,018,986 + +0.6
3,019,005 + -0.6
3,019,020 + -1.0
3,019,020 + -0.1
3,019,028 - +0.1
3,019,028 - -0.7
3,019,058 + +1.1
3,019,058 + -0.2
3,019,068 + -2.3
3,019,081 + -0.2
3,019,081 + -1.8
3,019,089 + +1.4
3,019,113 + +1.1
3,019,118 + +1.6
3,019,118 + -2.1
3,019,129 + +0.5
3,019,130 + -0.4
3,019,130 + -0.2
3,019,130 + -0.2
3,019,135 + Dsui_2842 0.11 -0.3
3,019,138 - Dsui_2842 0.12 -2.4
3,019,138 - Dsui_2842 0.12 -3.5
3,019,208 + Dsui_2842 0.36 -4.2
3,019,219 + Dsui_2842 0.40 +0.3
3,019,249 + Dsui_2842 0.51 -0.3
3,019,257 - -1.8
3,019,257 - Dsui_2842 0.53 -2.6
3,019,312 - Dsui_2842 0.72 -2.1
3,019,315 - Dsui_2842 0.73 -2.9
3,019,344 - Dsui_2842 0.83 -1.8
3,019,368 + -4.5
3,019,381 - -1.5
3,019,381 - -2.9
3,019,400 - -1.5
3,019,446 - -0.1
3,019,451 + -1.3
3,019,459 - +1.4
3,019,459 - +0.1
3,019,482 + -0.4
3,019,488 - +1.6
3,019,497 - +0.6
3,019,499 - +1.2
3,019,534 - +0.2
3,019,540 + +0.7
3,019,543 - -1.1
3,019,562 - +1.3
3,019,567 + -2.6
3,019,595 - +0.7
3,019,625 + +0.4
3,019,633 - +0.8
3,019,633 - -0.4
3,019,681 - +0.6
3,019,712 + +1.1
3,019,772 + -0.7
3,019,882 - -0.1
3,019,899 + -2.6
3,019,899 + -2.3
3,019,899 + -0.7
3,019,907 - +0.8
3,019,907 - +1.0
3,019,914 - -0.2
3,019,953 + -0.8
3,019,958 + -0.1
3,019,958 + -0.3
3,019,963 + -3.8
3,020,012 + +1.7
3,020,012 + +1.0
3,020,012 + -0.7
3,020,012 + -0.9
3,020,012 + +0.2
3,020,012 + -0.6
3,020,012 + -0.1
3,020,017 + -0.9
3,020,020 - -2.8
3,020,020 - -2.2
3,020,020 - +1.4
3,020,020 - +3.4
3,020,020 - -0.3
3,020,020 - -0.2
3,020,020 - -3.9
3,020,022 + -3.9
3,020,022 + +1.5
3,020,027 + +1.9
3,020,030 - -0.7
3,020,030 - +2.2
3,020,030 - -3.6
3,020,048 + -1.8
3,020,056 - -1.3
3,020,060 + -1.3
3,020,060 + +0.2
3,020,068 - Dsui_2843 0.10 -2.5
3,020,068 - Dsui_2843 0.10 +0.6
3,020,135 + Dsui_2843 0.15 +0.6
3,020,202 + Dsui_2843 0.20 -3.6
3,020,202 + Dsui_2843 0.20 +0.3
3,020,202 + Dsui_2843 0.20 -0.8
3,020,202 + Dsui_2843 0.20 -2.9
3,020,202 + Dsui_2843 0.20 +0.4
3,020,202 + Dsui_2843 0.20 +1.2
3,020,202 + Dsui_2843 0.20 -2.1
3,020,206 + Dsui_2843 0.20 -0.5
3,020,210 - Dsui_2843 0.20 -1.3
3,020,210 - Dsui_2843 0.20 +0.1
3,020,212 + Dsui_2843 0.20 -0.5
3,020,212 + Dsui_2843 0.20 -1.4
3,020,212 + Dsui_2843 0.20 -1.1
3,020,247 - Dsui_2843 0.23 -1.3
3,020,264 + Dsui_2843 0.24 -2.3
3,020,272 - Dsui_2843 0.25 +0.8
3,020,272 - Dsui_2843 0.25 -0.5
3,020,288 + Dsui_2843 0.26 -2.4
3,020,301 - Dsui_2843 0.27 -1.4
3,020,301 - Dsui_2843 0.27 -0.2
3,020,306 - Dsui_2843 0.27 +0.5
3,020,310 + Dsui_2843 0.27 -0.8
3,020,319 + Dsui_2843 0.28 -0.5
3,020,332 - +1.6
3,020,371 - Dsui_2843 0.32 +1.4
3,020,371 - Dsui_2843 0.32 +0.6
3,020,372 - Dsui_2843 0.32 +1.2

Or see this region's nucleotide sequence