Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2841 and Dsui_2842 overlap by 4 nucleotides Dsui_2842 and Dsui_2843 are separated by 536 nucleotides
Dsui_2841: Dsui_2841 - His-Xaa-Ser repeat-associated upstream radical SAM protein, at 3,017,645 to 3,019,105
_2841
Dsui_2842: Dsui_2842 - radical SAM pair-associated protein, at 3,019,102 to 3,019,392
_2842
Dsui_2843: Dsui_2843 - hypothetical protein, at 3,019,929 to 3,021,314
_2843
Position (kb)
3019
3020 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 3018.102 kb on - strand, within Dsui_2841 at 3018.117 kb on + strand, within Dsui_2841 at 3018.140 kb on - strand, within Dsui_2841 at 3018.140 kb on - strand, within Dsui_2841 at 3018.140 kb on - strand, within Dsui_2841 at 3018.140 kb on - strand, within Dsui_2841 at 3018.162 kb on - strand, within Dsui_2841 at 3018.190 kb on - strand, within Dsui_2841 at 3018.193 kb on - strand, within Dsui_2841 at 3018.195 kb on - strand, within Dsui_2841 at 3018.195 kb on - strand, within Dsui_2841 at 3018.202 kb on - strand, within Dsui_2841 at 3018.202 kb on - strand, within Dsui_2841 at 3018.218 kb on - strand, within Dsui_2841 at 3018.223 kb on + strand, within Dsui_2841 at 3018.231 kb on - strand, within Dsui_2841 at 3018.231 kb on - strand, within Dsui_2841 at 3018.238 kb on - strand, within Dsui_2841 at 3018.238 kb on - strand, within Dsui_2841 at 3018.269 kb on + strand, within Dsui_2841 at 3018.271 kb on - strand, within Dsui_2841 at 3018.385 kb on - strand, within Dsui_2841 at 3018.418 kb on + strand, within Dsui_2841 at 3018.425 kb on - strand, within Dsui_2841 at 3018.445 kb on + strand, within Dsui_2841 at 3018.462 kb on - strand, within Dsui_2841 at 3018.472 kb on + strand, within Dsui_2841 at 3018.472 kb on + strand, within Dsui_2841 at 3018.475 kb on - strand, within Dsui_2841 at 3018.480 kb on - strand, within Dsui_2841 at 3018.508 kb on + strand, within Dsui_2841 at 3018.528 kb on - strand, within Dsui_2841 at 3018.564 kb on + strand, within Dsui_2841 at 3018.564 kb on + strand, within Dsui_2841 at 3018.575 kb on - strand, within Dsui_2841 at 3018.633 kb on - strand, within Dsui_2841 at 3018.682 kb on - strand, within Dsui_2841 at 3018.689 kb on - strand, within Dsui_2841 at 3018.750 kb on + strand, within Dsui_2841 at 3018.764 kb on + strand, within Dsui_2841 at 3018.777 kb on - strand, within Dsui_2841 at 3018.827 kb on - strand, within Dsui_2841 at 3018.829 kb on + strand, within Dsui_2841 at 3018.829 kb on + strand, within Dsui_2841 at 3018.829 kb on + strand, within Dsui_2841 at 3018.829 kb on + strand, within Dsui_2841 at 3018.829 kb on + strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.837 kb on - strand, within Dsui_2841 at 3018.842 kb on - strand, within Dsui_2841 at 3018.856 kb on + strand, within Dsui_2841 at 3018.856 kb on + strand, within Dsui_2841 at 3018.861 kb on + strand, within Dsui_2841 at 3018.864 kb on - strand, within Dsui_2841 at 3018.864 kb on - strand, within Dsui_2841 at 3018.868 kb on + strand, within Dsui_2841 at 3018.869 kb on - strand, within Dsui_2841 at 3018.869 kb on - strand, within Dsui_2841 at 3018.881 kb on - strand, within Dsui_2841 at 3018.887 kb on - strand, within Dsui_2841 at 3018.887 kb on - strand, within Dsui_2841 at 3018.889 kb on + strand, within Dsui_2841 at 3018.917 kb on + strand, within Dsui_2841 at 3018.930 kb on + strand, within Dsui_2841 at 3018.938 kb on - strand, within Dsui_2841 at 3018.956 kb on - strand, within Dsui_2841 at 3018.986 kb on + strand at 3019.005 kb on + strand at 3019.020 kb on + strand at 3019.020 kb on + strand at 3019.028 kb on - strand at 3019.028 kb on - strand at 3019.058 kb on + strand at 3019.058 kb on + strand at 3019.068 kb on + strand at 3019.081 kb on + strand at 3019.081 kb on + strand at 3019.089 kb on + strand at 3019.113 kb on + strand at 3019.118 kb on + strand at 3019.118 kb on + strand at 3019.129 kb on + strand at 3019.130 kb on + strand at 3019.130 kb on + strand at 3019.130 kb on + strand at 3019.135 kb on + strand, within Dsui_2842 at 3019.138 kb on - strand, within Dsui_2842 at 3019.138 kb on - strand, within Dsui_2842 at 3019.208 kb on + strand, within Dsui_2842 at 3019.219 kb on + strand, within Dsui_2842 at 3019.249 kb on + strand, within Dsui_2842 at 3019.257 kb on - strand at 3019.257 kb on - strand, within Dsui_2842 at 3019.312 kb on - strand, within Dsui_2842 at 3019.315 kb on - strand, within Dsui_2842 at 3019.344 kb on - strand, within Dsui_2842 at 3019.368 kb on + strand at 3019.381 kb on - strand at 3019.381 kb on - strand at 3019.400 kb on - strand at 3019.446 kb on - strand at 3019.451 kb on + strand at 3019.459 kb on - strand at 3019.459 kb on - strand at 3019.482 kb on + strand at 3019.488 kb on - strand at 3019.497 kb on - strand at 3019.499 kb on - strand at 3019.534 kb on - strand at 3019.540 kb on + strand at 3019.543 kb on - strand at 3019.562 kb on - strand at 3019.567 kb on + strand at 3019.595 kb on - strand at 3019.625 kb on + strand at 3019.633 kb on - strand at 3019.633 kb on - strand at 3019.681 kb on - strand at 3019.712 kb on + strand at 3019.772 kb on + strand at 3019.882 kb on - strand at 3019.899 kb on + strand at 3019.899 kb on + strand at 3019.899 kb on + strand at 3019.907 kb on - strand at 3019.907 kb on - strand at 3019.914 kb on - strand at 3019.953 kb on + strand at 3019.958 kb on + strand at 3019.958 kb on + strand at 3019.963 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.012 kb on + strand at 3020.017 kb on + strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.020 kb on - strand at 3020.022 kb on + strand at 3020.022 kb on + strand at 3020.027 kb on + strand at 3020.030 kb on - strand at 3020.030 kb on - strand at 3020.030 kb on - strand at 3020.048 kb on + strand at 3020.056 kb on - strand at 3020.060 kb on + strand at 3020.060 kb on + strand at 3020.068 kb on - strand, within Dsui_2843 at 3020.068 kb on - strand, within Dsui_2843 at 3020.135 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.202 kb on + strand, within Dsui_2843 at 3020.206 kb on + strand, within Dsui_2843 at 3020.210 kb on - strand, within Dsui_2843 at 3020.210 kb on - strand, within Dsui_2843 at 3020.212 kb on + strand, within Dsui_2843 at 3020.212 kb on + strand, within Dsui_2843 at 3020.212 kb on + strand, within Dsui_2843 at 3020.247 kb on - strand, within Dsui_2843 at 3020.264 kb on + strand, within Dsui_2843 at 3020.272 kb on - strand, within Dsui_2843 at 3020.272 kb on - strand, within Dsui_2843 at 3020.288 kb on + strand, within Dsui_2843 at 3020.301 kb on - strand, within Dsui_2843 at 3020.301 kb on - strand, within Dsui_2843 at 3020.306 kb on - strand, within Dsui_2843 at 3020.310 kb on + strand, within Dsui_2843 at 3020.319 kb on + strand, within Dsui_2843 at 3020.332 kb on - strand at 3020.371 kb on - strand, within Dsui_2843 at 3020.371 kb on - strand, within Dsui_2843 at 3020.372 kb on - strand, within Dsui_2843
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,018,102 - Dsui_2841 0.31 +0.0 3,018,117 + Dsui_2841 0.32 -0.6 3,018,140 - Dsui_2841 0.34 -1.1 3,018,140 - Dsui_2841 0.34 -3.1 3,018,140 - Dsui_2841 0.34 -2.6 3,018,140 - Dsui_2841 0.34 -3.6 3,018,162 - Dsui_2841 0.35 +0.1 3,018,190 - Dsui_2841 0.37 +0.2 3,018,193 - Dsui_2841 0.38 +0.6 3,018,195 - Dsui_2841 0.38 -0.2 3,018,195 - Dsui_2841 0.38 -0.4 3,018,202 - Dsui_2841 0.38 +0.1 3,018,202 - Dsui_2841 0.38 -0.9 3,018,218 - Dsui_2841 0.39 -1.9 3,018,223 + Dsui_2841 0.40 -3.6 3,018,231 - Dsui_2841 0.40 +0.0 3,018,231 - Dsui_2841 0.40 +0.4 3,018,238 - Dsui_2841 0.41 -0.1 3,018,238 - Dsui_2841 0.41 +0.6 3,018,269 + Dsui_2841 0.43 -0.4 3,018,271 - Dsui_2841 0.43 -1.1 3,018,385 - Dsui_2841 0.51 -0.7 3,018,418 + Dsui_2841 0.53 -1.2 3,018,425 - Dsui_2841 0.53 -2.7 3,018,445 + Dsui_2841 0.55 -3.1 3,018,462 - Dsui_2841 0.56 -0.4 3,018,472 + Dsui_2841 0.57 -2.8 3,018,472 + Dsui_2841 0.57 -2.0 3,018,475 - Dsui_2841 0.57 +0.7 3,018,480 - Dsui_2841 0.57 -0.1 3,018,508 + Dsui_2841 0.59 -1.1 3,018,528 - Dsui_2841 0.60 -0.9 3,018,564 + Dsui_2841 0.63 -3.2 3,018,564 + Dsui_2841 0.63 -1.9 3,018,575 - Dsui_2841 0.64 -0.2 3,018,633 - Dsui_2841 0.68 -1.3 3,018,682 - Dsui_2841 0.71 -0.3 3,018,689 - Dsui_2841 0.71 -0.1 3,018,750 + Dsui_2841 0.76 +2.0 3,018,764 + Dsui_2841 0.77 -1.7 3,018,777 - Dsui_2841 0.77 -1.3 3,018,827 - Dsui_2841 0.81 -2.4 3,018,829 + Dsui_2841 0.81 +0.1 3,018,829 + Dsui_2841 0.81 -3.4 3,018,829 + Dsui_2841 0.81 -1.1 3,018,829 + Dsui_2841 0.81 -0.3 3,018,829 + Dsui_2841 0.81 -1.8 3,018,837 - Dsui_2841 0.82 +0.2 3,018,837 - Dsui_2841 0.82 +0.0 3,018,837 - Dsui_2841 0.82 -0.7 3,018,837 - Dsui_2841 0.82 -1.5 3,018,837 - Dsui_2841 0.82 +0.4 3,018,837 - Dsui_2841 0.82 -0.4 3,018,837 - Dsui_2841 0.82 +0.2 3,018,837 - Dsui_2841 0.82 +0.3 3,018,837 - Dsui_2841 0.82 -0.8 3,018,837 - Dsui_2841 0.82 -0.4 3,018,837 - Dsui_2841 0.82 -2.3 3,018,837 - Dsui_2841 0.82 +0.1 3,018,837 - Dsui_2841 0.82 -1.1 3,018,837 - Dsui_2841 0.82 -0.2 3,018,842 - Dsui_2841 0.82 +1.9 3,018,856 + Dsui_2841 0.83 -4.8 3,018,856 + Dsui_2841 0.83 -1.1 3,018,861 + Dsui_2841 0.83 +0.2 3,018,864 - Dsui_2841 0.83 -0.5 3,018,864 - Dsui_2841 0.83 -0.6 3,018,868 + Dsui_2841 0.84 -0.7 3,018,869 - Dsui_2841 0.84 -0.6 3,018,869 - Dsui_2841 0.84 -1.9 3,018,881 - Dsui_2841 0.85 +1.6 3,018,887 - Dsui_2841 0.85 +1.3 3,018,887 - Dsui_2841 0.85 +1.5 3,018,889 + Dsui_2841 0.85 -0.3 3,018,917 + Dsui_2841 0.87 -0.5 3,018,930 + Dsui_2841 0.88 -1.9 3,018,938 - Dsui_2841 0.89 -1.5 3,018,956 - Dsui_2841 0.90 -2.4 3,018,986 + +0.6 3,019,005 + -0.6 3,019,020 + -1.0 3,019,020 + -0.1 3,019,028 - +0.1 3,019,028 - -0.7 3,019,058 + +1.1 3,019,058 + -0.2 3,019,068 + -2.3 3,019,081 + -0.2 3,019,081 + -1.8 3,019,089 + +1.4 3,019,113 + +1.1 3,019,118 + +1.6 3,019,118 + -2.1 3,019,129 + +0.5 3,019,130 + -0.4 3,019,130 + -0.2 3,019,130 + -0.2 3,019,135 + Dsui_2842 0.11 -0.3 3,019,138 - Dsui_2842 0.12 -2.4 3,019,138 - Dsui_2842 0.12 -3.5 3,019,208 + Dsui_2842 0.36 -4.2 3,019,219 + Dsui_2842 0.40 +0.3 3,019,249 + Dsui_2842 0.51 -0.3 3,019,257 - -1.8 3,019,257 - Dsui_2842 0.53 -2.6 3,019,312 - Dsui_2842 0.72 -2.1 3,019,315 - Dsui_2842 0.73 -2.9 3,019,344 - Dsui_2842 0.83 -1.8 3,019,368 + -4.5 3,019,381 - -1.5 3,019,381 - -2.9 3,019,400 - -1.5 3,019,446 - -0.1 3,019,451 + -1.3 3,019,459 - +1.4 3,019,459 - +0.1 3,019,482 + -0.4 3,019,488 - +1.6 3,019,497 - +0.6 3,019,499 - +1.2 3,019,534 - +0.2 3,019,540 + +0.7 3,019,543 - -1.1 3,019,562 - +1.3 3,019,567 + -2.6 3,019,595 - +0.7 3,019,625 + +0.4 3,019,633 - +0.8 3,019,633 - -0.4 3,019,681 - +0.6 3,019,712 + +1.1 3,019,772 + -0.7 3,019,882 - -0.1 3,019,899 + -2.6 3,019,899 + -2.3 3,019,899 + -0.7 3,019,907 - +0.8 3,019,907 - +1.0 3,019,914 - -0.2 3,019,953 + -0.8 3,019,958 + -0.1 3,019,958 + -0.3 3,019,963 + -3.8 3,020,012 + +1.7 3,020,012 + +1.0 3,020,012 + -0.7 3,020,012 + -0.9 3,020,012 + +0.2 3,020,012 + -0.6 3,020,012 + -0.1 3,020,017 + -0.9 3,020,020 - -2.8 3,020,020 - -2.2 3,020,020 - +1.4 3,020,020 - +3.4 3,020,020 - -0.3 3,020,020 - -0.2 3,020,020 - -3.9 3,020,022 + -3.9 3,020,022 + +1.5 3,020,027 + +1.9 3,020,030 - -0.7 3,020,030 - +2.2 3,020,030 - -3.6 3,020,048 + -1.8 3,020,056 - -1.3 3,020,060 + -1.3 3,020,060 + +0.2 3,020,068 - Dsui_2843 0.10 -2.5 3,020,068 - Dsui_2843 0.10 +0.6 3,020,135 + Dsui_2843 0.15 +0.6 3,020,202 + Dsui_2843 0.20 -3.6 3,020,202 + Dsui_2843 0.20 +0.3 3,020,202 + Dsui_2843 0.20 -0.8 3,020,202 + Dsui_2843 0.20 -2.9 3,020,202 + Dsui_2843 0.20 +0.4 3,020,202 + Dsui_2843 0.20 +1.2 3,020,202 + Dsui_2843 0.20 -2.1 3,020,206 + Dsui_2843 0.20 -0.5 3,020,210 - Dsui_2843 0.20 -1.3 3,020,210 - Dsui_2843 0.20 +0.1 3,020,212 + Dsui_2843 0.20 -0.5 3,020,212 + Dsui_2843 0.20 -1.4 3,020,212 + Dsui_2843 0.20 -1.1 3,020,247 - Dsui_2843 0.23 -1.3 3,020,264 + Dsui_2843 0.24 -2.3 3,020,272 - Dsui_2843 0.25 +0.8 3,020,272 - Dsui_2843 0.25 -0.5 3,020,288 + Dsui_2843 0.26 -2.4 3,020,301 - Dsui_2843 0.27 -1.4 3,020,301 - Dsui_2843 0.27 -0.2 3,020,306 - Dsui_2843 0.27 +0.5 3,020,310 + Dsui_2843 0.27 -0.8 3,020,319 + Dsui_2843 0.28 -0.5 3,020,332 - +1.6 3,020,371 - Dsui_2843 0.32 +1.4 3,020,371 - Dsui_2843 0.32 +0.6 3,020,372 - Dsui_2843 0.32 +1.2
Or see this region's nucleotide sequence