Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2617 and Dsui_2618 are separated by 18 nucleotides Dsui_2618 and Dsui_2619 are separated by 40 nucleotides Dsui_2619 and Dsui_2620 are separated by 4 nucleotides
Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168
_2617
Dsui_2618: Dsui_2618 - putative transcriptional regulator, at 2,771,187 to 2,771,405
_2618
Dsui_2619: Dsui_2619 - hypothetical protein, at 2,771,446 to 2,771,676
_2619
Dsui_2620: Dsui_2620 - hypothetical protein, at 2,771,681 to 2,773,621
_2620
Position (kb)
2771
2772 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2770.520 kb on + strand, within Dsui_2617 at 2771.592 kb on + strand, within Dsui_2619 at 2771.730 kb on + strand at 2771.730 kb on + strand at 2771.735 kb on + strand at 2771.790 kb on - strand at 2771.803 kb on + strand at 2771.906 kb on - strand, within Dsui_2620 at 2772.105 kb on - strand, within Dsui_2620 at 2772.213 kb on + strand, within Dsui_2620 at 2772.251 kb on + strand, within Dsui_2620 at 2772.341 kb on + strand, within Dsui_2620 at 2772.450 kb on - strand, within Dsui_2620 at 2772.456 kb on - strand, within Dsui_2620 at 2772.467 kb on - strand, within Dsui_2620 at 2772.542 kb on + strand, within Dsui_2620 at 2772.610 kb on - strand, within Dsui_2620 at 2772.616 kb on + strand at 2772.636 kb on + strand, within Dsui_2620 at 2772.644 kb on - strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,770,520 + Dsui_2617 0.28 -0.9 2,771,592 + Dsui_2619 0.63 -0.3 2,771,730 + -1.6 2,771,730 + -2.2 2,771,735 + -1.6 2,771,790 - -0.4 2,771,803 + -2.9 2,771,906 - Dsui_2620 0.12 -1.1 2,772,105 - Dsui_2620 0.22 -1.8 2,772,213 + Dsui_2620 0.27 -1.4 2,772,251 + Dsui_2620 0.29 -1.1 2,772,341 + Dsui_2620 0.34 -1.9 2,772,450 - Dsui_2620 0.40 -2.9 2,772,456 - Dsui_2620 0.40 -1.5 2,772,467 - Dsui_2620 0.40 -0.4 2,772,542 + Dsui_2620 0.44 +2.0 2,772,610 - Dsui_2620 0.48 +0.6 2,772,616 + +0.2 2,772,636 + Dsui_2620 0.49 -0.8 2,772,644 - Dsui_2620 0.50 -0.3 2,772,659 + Dsui_2620 0.50 -1.6 2,772,659 + Dsui_2620 0.50 -1.8
Or see this region's nucleotide sequence