Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1984 and Dsui_1985 overlap by 4 nucleotides Dsui_1985 and Dsui_1986 are separated by 28 nucleotides Dsui_1986 and Dsui_1987 are separated by 24 nucleotides Dsui_1987 and Dsui_1988 are separated by 105 nucleotides
Dsui_1984: Dsui_1984 - thioredoxin-dependent adenylylsulfate APS reductase, at 2,093,708 to 2,094,430
_1984
Dsui_1985: Dsui_1985 - hypothetical protein, at 2,094,427 to 2,094,945
_1985
Dsui_1986: Dsui_1986 - sulfite reductase, beta subunit (hemoprotein), at 2,094,974 to 2,096,650
_1986
Dsui_1987: Dsui_1987 - putative permease, at 2,096,675 to 2,097,448
_1987
Dsui_1988: Dsui_1988 - transcriptional regulator, at 2,097,554 to 2,098,528
_1988
Position (kb)
2094
2095
2096
2097 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 2094.992 kb on - strand at 2095.013 kb on - strand at 2096.707 kb on - strand at 2096.785 kb on + strand at 2096.785 kb on + strand at 2096.871 kb on - strand, within Dsui_1987 at 2096.925 kb on - strand, within Dsui_1987 at 2096.925 kb on - strand, within Dsui_1987 at 2096.997 kb on - strand, within Dsui_1987 at 2096.997 kb on - strand, within Dsui_1987 at 2097.003 kb on - strand, within Dsui_1987 at 2097.063 kb on + strand at 2097.063 kb on + strand at 2097.069 kb on - strand, within Dsui_1987 at 2097.071 kb on - strand, within Dsui_1987 at 2097.191 kb on - strand, within Dsui_1987 at 2097.192 kb on - strand, within Dsui_1987 at 2097.276 kb on - strand, within Dsui_1987 at 2097.308 kb on - strand, within Dsui_1987 at 2097.325 kb on - strand, within Dsui_1987 at 2097.441 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,094,992 - +2.3 2,095,013 - +0.1 2,096,707 - +1.3 2,096,785 + +5.0 2,096,785 + +1.1 2,096,871 - Dsui_1987 0.25 +0.7 2,096,925 - Dsui_1987 0.32 +1.2 2,096,925 - Dsui_1987 0.32 +1.5 2,096,997 - Dsui_1987 0.42 +1.6 2,096,997 - Dsui_1987 0.42 +0.7 2,097,003 - Dsui_1987 0.42 +0.9 2,097,063 + -1.3 2,097,063 + -1.5 2,097,069 - Dsui_1987 0.51 +1.1 2,097,071 - Dsui_1987 0.51 -0.5 2,097,191 - Dsui_1987 0.67 +0.5 2,097,192 - Dsui_1987 0.67 +1.2 2,097,276 - Dsui_1987 0.78 +0.8 2,097,308 - Dsui_1987 0.82 +1.7 2,097,325 - Dsui_1987 0.84 +0.8 2,097,441 - +2.8
Or see this region's nucleotide sequence