Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1946 and Dsui_1947 are separated by 52 nucleotides Dsui_1947 and Dsui_1948 are separated by 10 nucleotides
Dsui_1946: Dsui_1946 - putative N-acetylglucosaminyl transferase, at 2,057,965 to 2,059,134
_1946
Dsui_1947: Dsui_1947 - nucleotide sugar dehydrogenase, at 2,059,187 to 2,060,512
_1947
Dsui_1948: Dsui_1948 - dTDP-glucose 4,6-dehydratase, at 2,060,523 to 2,061,584
_1948
Position (kb)
2059
2060
2061 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2058.271 kb on - strand, within Dsui_1946 at 2058.321 kb on + strand, within Dsui_1946 at 2058.377 kb on + strand, within Dsui_1946 at 2058.433 kb on + strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.509 kb on - strand at 2058.638 kb on + strand, within Dsui_1946 at 2058.683 kb on + strand, within Dsui_1946 at 2058.739 kb on + strand, within Dsui_1946 at 2058.811 kb on + strand, within Dsui_1946 at 2058.856 kb on - strand, within Dsui_1946 at 2058.856 kb on - strand, within Dsui_1946 at 2058.936 kb on + strand, within Dsui_1946 at 2059.020 kb on - strand at 2059.037 kb on + strand at 2059.037 kb on + strand at 2059.062 kb on + strand at 2059.070 kb on - strand at 2059.106 kb on - strand at 2059.133 kb on + strand at 2059.137 kb on - strand at 2059.150 kb on + strand at 2059.158 kb on - strand at 2059.158 kb on - strand at 2059.168 kb on - strand at 2059.170 kb on + strand at 2059.215 kb on + strand at 2059.215 kb on + strand at 2059.269 kb on + strand at 2060.241 kb on + strand, within Dsui_1947 at 2060.303 kb on + strand, within Dsui_1947 at 2060.356 kb on + strand, within Dsui_1947 at 2060.415 kb on + strand at 2060.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,058,271 - Dsui_1946 0.26 -1.8 2,058,321 + Dsui_1946 0.30 +0.4 2,058,377 + Dsui_1946 0.35 +0.1 2,058,433 + Dsui_1946 0.40 +0.9 2,058,470 - Dsui_1946 0.43 -1.5 2,058,470 - Dsui_1946 0.43 -3.6 2,058,501 + Dsui_1946 0.46 -0.2 2,058,501 + Dsui_1946 0.46 +1.1 2,058,509 - -1.3 2,058,638 + Dsui_1946 0.58 -0.5 2,058,683 + Dsui_1946 0.61 -0.9 2,058,739 + Dsui_1946 0.66 -0.9 2,058,811 + Dsui_1946 0.72 +1.3 2,058,856 - Dsui_1946 0.76 -2.6 2,058,856 - Dsui_1946 0.76 -0.5 2,058,936 + Dsui_1946 0.83 +0.8 2,059,020 - -3.5 2,059,037 + +1.0 2,059,037 + -0.6 2,059,062 + +0.6 2,059,070 - +0.4 2,059,106 - -4.0 2,059,133 + +1.2 2,059,137 - -0.7 2,059,150 + +1.6 2,059,158 - -2.8 2,059,158 - -1.2 2,059,168 - -3.6 2,059,170 + +0.8 2,059,215 + -0.7 2,059,215 + -1.0 2,059,269 + +1.3 2,060,241 + Dsui_1947 0.79 -1.3 2,060,303 + Dsui_1947 0.84 -0.3 2,060,356 + Dsui_1947 0.88 -2.7 2,060,415 + -1.3 2,060,495 + -0.3
Or see this region's nucleotide sequence