Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1488 and Dsui_1489 are separated by 28 nucleotides Dsui_1489 and Dsui_1490 are separated by 227 nucleotides Dsui_1490 and Dsui_1491 are separated by 32 nucleotides
Dsui_1488: Dsui_1488 - putative metal-dependent hydrolase, at 1,550,640 to 1,551,002
_1488
Dsui_1489: Dsui_1489 - hypothetical protein, at 1,551,031 to 1,552,383
_1489
Dsui_1490: Dsui_1490 - DNA-binding protein, excisionase family, at 1,552,611 to 1,552,883
_1490
Dsui_1491: Dsui_1491 - molecular chaperone (small heat shock protein), at 1,552,916 to 1,553,485
_1491
Position (kb)
1551
1552
1553 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1550.034 kb on - strand at 1550.072 kb on + strand at 1550.140 kb on - strand at 1550.184 kb on + strand at 1550.221 kb on - strand at 1550.273 kb on - strand at 1550.278 kb on - strand at 1550.411 kb on + strand at 1550.419 kb on - strand at 1550.690 kb on - strand, within Dsui_1488 at 1550.822 kb on + strand, within Dsui_1488 at 1550.894 kb on - strand, within Dsui_1488 at 1550.911 kb on - strand, within Dsui_1488 at 1550.911 kb on - strand, within Dsui_1488 at 1550.920 kb on + strand, within Dsui_1488 at 1550.920 kb on + strand, within Dsui_1488 at 1551.041 kb on - strand at 1551.091 kb on + strand at 1551.218 kb on - strand, within Dsui_1489 at 1551.315 kb on - strand, within Dsui_1489 at 1551.400 kb on - strand, within Dsui_1489 at 1551.479 kb on - strand, within Dsui_1489 at 1551.535 kb on - strand at 1551.596 kb on + strand, within Dsui_1489 at 1551.660 kb on + strand, within Dsui_1489 at 1551.660 kb on + strand, within Dsui_1489 at 1551.698 kb on + strand, within Dsui_1489 at 1551.799 kb on - strand, within Dsui_1489 at 1551.809 kb on - strand, within Dsui_1489 at 1551.809 kb on - strand, within Dsui_1489 at 1551.934 kb on + strand, within Dsui_1489 at 1551.949 kb on + strand, within Dsui_1489 at 1552.041 kb on + strand, within Dsui_1489 at 1552.044 kb on - strand, within Dsui_1489 at 1552.215 kb on - strand, within Dsui_1489 at 1552.255 kb on - strand at 1552.264 kb on + strand at 1552.272 kb on - strand at 1552.411 kb on + strand at 1552.693 kb on - strand, within Dsui_1490 at 1552.703 kb on - strand, within Dsui_1490 at 1552.781 kb on + strand, within Dsui_1490 at 1552.791 kb on + strand, within Dsui_1490 at 1552.803 kb on - strand, within Dsui_1490 at 1552.971 kb on + strand at 1552.973 kb on + strand, within Dsui_1491 at 1552.979 kb on - strand, within Dsui_1491 at 1552.997 kb on - strand, within Dsui_1491 at 1553.048 kb on - strand, within Dsui_1491 at 1553.191 kb on - strand, within Dsui_1491 at 1553.209 kb on + strand, within Dsui_1491 at 1553.252 kb on + strand, within Dsui_1491 at 1553.309 kb on + strand, within Dsui_1491 at 1553.351 kb on + strand, within Dsui_1491
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,550,034 - -1.6 1,550,072 + -0.1 1,550,140 - -0.8 1,550,184 + -2.5 1,550,221 - +0.0 1,550,273 - +0.1 1,550,278 - -1.0 1,550,411 + +0.5 1,550,419 - +0.6 1,550,690 - Dsui_1488 0.14 -1.5 1,550,822 + Dsui_1488 0.50 +0.3 1,550,894 - Dsui_1488 0.70 -2.2 1,550,911 - Dsui_1488 0.75 -0.8 1,550,911 - Dsui_1488 0.75 -0.5 1,550,920 + Dsui_1488 0.77 -2.7 1,550,920 + Dsui_1488 0.77 +0.7 1,551,041 - -0.2 1,551,091 + +0.0 1,551,218 - Dsui_1489 0.14 -1.1 1,551,315 - Dsui_1489 0.21 -0.4 1,551,400 - Dsui_1489 0.27 -1.6 1,551,479 - Dsui_1489 0.33 -2.3 1,551,535 - -1.2 1,551,596 + Dsui_1489 0.42 -2.3 1,551,660 + Dsui_1489 0.46 -1.4 1,551,660 + Dsui_1489 0.46 +0.3 1,551,698 + Dsui_1489 0.49 -0.9 1,551,799 - Dsui_1489 0.57 +0.7 1,551,809 - Dsui_1489 0.58 -1.8 1,551,809 - Dsui_1489 0.58 +0.3 1,551,934 + Dsui_1489 0.67 +1.6 1,551,949 + Dsui_1489 0.68 +0.7 1,552,041 + Dsui_1489 0.75 -1.1 1,552,044 - Dsui_1489 0.75 -1.8 1,552,215 - Dsui_1489 0.88 -2.6 1,552,255 - -0.8 1,552,264 + +0.8 1,552,272 - -2.0 1,552,411 + -0.0 1,552,693 - Dsui_1490 0.30 +0.0 1,552,703 - Dsui_1490 0.34 -2.3 1,552,781 + Dsui_1490 0.62 -1.7 1,552,791 + Dsui_1490 0.66 +0.7 1,552,803 - Dsui_1490 0.70 -3.0 1,552,971 + +0.6 1,552,973 + Dsui_1491 0.10 +0.8 1,552,979 - Dsui_1491 0.11 -1.0 1,552,997 - Dsui_1491 0.14 -0.3 1,553,048 - Dsui_1491 0.23 -2.3 1,553,191 - Dsui_1491 0.48 +0.5 1,553,209 + Dsui_1491 0.51 +2.0 1,553,252 + Dsui_1491 0.59 +0.6 1,553,309 + Dsui_1491 0.69 +2.1 1,553,351 + Dsui_1491 0.76 +0.8
Or see this region's nucleotide sequence